Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 463 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (EC 6.3.2.10) from Sphingobium sp. HT1-2

 Score =  182 bits (462), Expect = 2e-50
 Identities = 146/451 (32%), Positives = 209/451 (46%), Gaps = 15/451 (3%)

Query: 8   SELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGAL 67
           +E+  A    V S+  +  GV+ DSR +  G LFVA+ G   DGH ++++  A+GA GA+
Sbjct: 8   AEIADATGGAV-SAPFAVSGVAFDSREVGAGDLFVAMKGETTDGHKFVDKAFAQGAAGAI 66

Query: 68  VQRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTR 127
           V   V     P +LVAD+  AL  LG  +R      +  +TGS GKT  KE L   L   
Sbjct: 67  VSEPV---DYPHVLVADSAAALEALGRASRKRSNAKIIGVTGSVGKTGTKEALFHALERA 123

Query: 128 GP--VHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVINN 185
            P  VH +  + NN  G PL+L  +  +    V E+G +  GE+A      +P+V ++  
Sbjct: 124 CPGGVHRSVKSYNNHVGVPLSLARMPRDAAYGVFEMGMNHAGELAALTRQVRPNVAIVTA 183

Query: 186 AGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAA--GRKVLTFAV 243
              AH+  FG  EKI EAK EI EGL+  G AV+  D     T   +A      +LTF  
Sbjct: 184 IAPAHIEFFGTEEKIAEAKAEIFEGLEPGGTAVIPYDSPHVATLYGKAERHADHILTFG- 242

Query: 244 LNAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSL 303
            +  AD    +      G    T   P       +   G+H V+N+LA  AA  ALG  L
Sbjct: 243 FSPEADIFVRDTVPAPGGGTLVTAALPGVELCFTVGAPGDHWVSNSLAVLAAVEALGGDL 302

Query: 304 FGIATGLGAVQPVKG---RTVAQLATNGMRVIDDTYNANQSSICAAIDLL-KSFEGRKVL 359
                 L  +  + G   R +  +A     +ID++YNAN  S+ A +  L +    R++ 
Sbjct: 303 AAAGLALAEMPGLPGRGARRILPVAGGEALLIDESYNANPLSMAATLKQLGREQADRRIA 362

Query: 360 VLGDIAELGDWAEQSHREVG-AYAAGKVDALYAVGPNMAH-AVSVFGPGARHFVTQAELI 417
           VLG + ELG  + + H  +    +   VD    VG  MA  A ++ G  A   V  A   
Sbjct: 363 VLGGMRELGSRSTELHAALSQPLSENGVDYAILVGEEMAPLADALGGLVAFDHVPDAASA 422

Query: 418 QALTAAEHDKHTTILIKGSRSAVMENVVAAL 448
             L   E      IL+KGS    +  +VAAL
Sbjct: 423 TDLINKEMRAGDAILVKGSNGIGLSRLVAAL 453