Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 72/268 (26%), Positives = 108/268 (40%), Gaps = 29/268 (10%)

Query: 106 AITGSSGKTTVKELLAGVLRTRG--PVHATRGNL-----NNDFGAPLTLLELAPEHTAAV 158
           A+ G+ GKTT   LLA V    G  P     G L     N   G    L+  A E  A+ 
Sbjct: 120 AVAGTHGKTTTTSLLASVFAAGGLDPTFVIGGRLTAAGTNAQLGTSRYLIAEADESDASF 179

Query: 159 IELGASRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGP-EKIVEAKGEILEGLDASGIA 217
           + L               +P V V+ N    H+  + G   K+ +   E L  L   G+A
Sbjct: 180 LHL---------------QPMVAVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLA 224

Query: 218 VLNLDDKAFETWRVRAAGRKVLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHVQ 277
           V+ LDD       +    R  +T+   +  AD  A N+           L   +    V 
Sbjct: 225 VMCLDDPVVRE-ILPQVKRPTVTYG-FSEEADIRAINVRQQGMQTHFTVLRRDREPLEVS 282

Query: 278 LNLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGR--TVAQLATNGMRV-IDD 334
           +N+ GNHNV NALA  A A   G++   I  GL   Q V  R     +L   G  V + D
Sbjct: 283 VNMPGNHNVLNALATIAIATDEGITDEAIVQGLSGFQGVGRRFQVYGELPVEGGSVMLVD 342

Query: 335 TYNANQSSICAAIDLLK-SFEGRKVLVL 361
            Y  + + + A I  ++  +  R+++++
Sbjct: 343 DYGHHPTEVAAVIKAVRGGWPSRRLVIV 370