Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 429 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  186 bits (472), Expect = 1e-51
 Identities = 145/427 (33%), Positives = 210/427 (49%), Gaps = 22/427 (5%)

Query: 28  VSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGALVQRA--VADSTLPQLLVADT 85
           VS DSR  +   +F AL GP F G  +      KGA  A+V      AD+     +V DT
Sbjct: 18  VSTDSRAEQNQSMFFALNGPNFKGAKFAQMALEKGARYAVVDDPGMAADNVF---VVEDT 74

Query: 86  RLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTRGPVHATRGNLNNDFGAPL 145
            LAL +L   +R   + PV  ITGS+GKTT KEL+  VL  +  V  T+GNLNN  G PL
Sbjct: 75  LLALQELARHHRRQLSIPVIGITGSNGKTTSKELVHAVLSQKYNVLYTQGNLNNHIGVPL 134

Query: 146 TLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGPEKIVEAKG 205
           TLL + PEH  A+IE+GA+ +GEIA   A+  P   +I N G AH+  FG  E +   K 
Sbjct: 135 TLLRITPEHEMAIIEMGANHIGEIAQLSAIALPTHGLITNIGKAHLEGFGSLEGVARGKS 194

Query: 206 EILEGLDASGIAV-LNLDDKAFETWRVRAAGRKVLTFAVLNAAADFHASNITVDARGCPS 264
           E+   LD  G  V +N  ++      +    R++       A  D++ S +         
Sbjct: 195 ELYLHLDQHGGTVFINTGNE-----HLMRMARRIENKITYPAPHDYYHSELL----EASP 245

Query: 265 FTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGRT-VAQ 323
           + ++  +    V   L+G++N  N  AAA      GV L      +    PV  R+ V Q
Sbjct: 246 YVVYRDEEGHVVHTQLVGSYNYENMAAAACIGKFFGVPLQQANEAIARYSPVNNRSQVLQ 305

Query: 324 LATNGMRVIDDTYNANQSSICAAIDLLKSFEGR-KVLVLGDIAELGDWAEQSHREVGAYA 382
             +N   +I D YNAN +S+ AA+    + + + KV++LGD+ E+G  +E  HR +G   
Sbjct: 306 QGSN--TIILDAYNANPTSMAAAVRNFGNMKAQHKVVILGDMFEMGAESEAEHRLLGEVV 363

Query: 383 AGK-VDALYAVGPNMAHAVSVFGPGARHFVTQAELIQALTAAEHDKHTTILIKGSRSAVM 441
           A +  D +   G +M +A  V      +F T+ EL Q          + +LIKGSR   +
Sbjct: 364 AEQPFDTVILCGKHMKYAAEV-SEDFLYFETKPEL-QTWLRKNPIAESYVLIKGSRGMGL 421

Query: 442 ENVVAAL 448
           E + A L
Sbjct: 422 ETLTAEL 428