Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 465 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Kangiella aquimarina DSM 16071

 Score =  314 bits (804), Expect = 4e-90
 Identities = 197/456 (43%), Positives = 260/456 (57%), Gaps = 8/456 (1%)

Query: 5   MKFSELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAV 64
           +    + Q    ++   + + + V  DSR      LFVAL G  FDGH ++ +  A+GA+
Sbjct: 4   LSLKTIAQVTDGQLQGPEKTIEKVVTDSRVDCRDALFVALIGENFDGHKFVGKAKAEGAI 63

Query: 65  GALVQRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVL 124
             LV+ AV DS LPQ++VADT  ALG +    R      V  ITGS+GKTTVKE++A +L
Sbjct: 64  ALLVEHAV-DSDLPQVIVADTSKALGAIAGYVRDQVNPFVIGITGSAGKTTVKEMVASIL 122

Query: 125 RTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVIN 184
           R +G + AT+GN NN  G PLTLL L      AVIE+GA+ VGEIAY  ++ KP V VIN
Sbjct: 123 RQKGNLLATQGNFNNHIGVPLTLLRLKATDQFAVIEMGANHVGEIAYCASIAKPDVSVIN 182

Query: 185 NAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRKVLTFAVL 244
           N   AH+  FG  E + +AK EI EGL   G AV+NLD    + W  R      +T +  
Sbjct: 183 NVEAAHIEGFGSIEGVSKAKSEIYEGLSEEGTAVINLDSAFADDWAERFNSLHKVTVS-R 241

Query: 245 NAAADFHASNITVDARGCPSFTL-HTPQGNEH---VQLNLLGNHNVANALAAAAAAYALG 300
           +  A+F A N  + A G   F + HT  G+     VQL + G HNV+NAL AAA A   G
Sbjct: 242 HKDANFVADNCQLQANGNVLFEMQHTQDGSSQTISVQLPVPGMHNVSNALVAAALASVAG 301

Query: 301 VSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRKVLV 360
             +  I  GL  +  VKGR     A NG  +IDDTYNA+  ++ AAID L +  G K+LV
Sbjct: 302 ADMEMIKNGLETMVSVKGRLNQLKAANGALIIDDTYNASVPAVKAAIDYLATLSGTKLLV 361

Query: 361 LGDIAELGDWAEQSHREVGAYAAG-KVDALYAVGPNMAHAVSVFGPGARHFVTQAELIQA 419
           LGD+AELGD +E+ HREVG YA   K+D L   G  + H+   FG  A  F T+  L+  
Sbjct: 362 LGDMAELGDDSERYHREVGEYAKDRKIDRLLVCGEWVKHSAEAFGEKAHWFETKDLLVSY 421

Query: 420 LTAAEHDKHTTILIKGSRSAVMENVVAALCGSSTEK 455
           L +     +  IL+KGSRSA ME VV AL   + ++
Sbjct: 422 LKSIMQSDY-KILVKGSRSARMEQVVDALVAPAADE 456