Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 431 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  167 bits (424), Expect = 5e-46
 Identities = 134/426 (31%), Positives = 203/426 (47%), Gaps = 20/426 (4%)

Query: 27  GVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGALVQR---AVADSTLPQLLVA 83
           GVS D+R I+ G LF AL GP F+ + +  +    GA   ++     AVA      +LV 
Sbjct: 16  GVSTDTRKIEKGNLFFALKGPNFNANSFAAKALDMGASAVVIDEEEFAVAGDAR-YVLVD 74

Query: 84  DTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTRGPVHATRGNLNNDFGA 143
           D  +AL QL   +R     P  AITGS+GKTT KEL+  VL  +   +AT GNLNN  G 
Sbjct: 75  DVLVALQQLANHHRKQLDIPFLAITGSNGKTTTKELINAVLAKKYKTYATVGNLNNHIGV 134

Query: 144 PLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGPEKIVEA 203
           PLTLL +       ++E+GA+++G+IA    + +P   +I N G AH+  FGG E ++ A
Sbjct: 135 PLTLLAMDETTEIGIVEMGANKIGDIAALCEIAEPTHGLITNIGRAHLEGFGGFEGVLRA 194

Query: 204 KGEILEGL-DASGIAVLNLDDKAFETWRVRAAGRKVLTFAVLNAAADFHASNITVDARGC 262
           K E+ + L    G   +N  ++       R      +T+    +  DF+   +       
Sbjct: 195 KTELYQFLISHKGKIFVNSQNQVLANMIKRM--DDPITYP---SKGDFYHCELVA---AN 246

Query: 263 PSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGRTVA 322
           P  T    +G+ H +  +LG +N  N   A       GV     AT + A  P  G   +
Sbjct: 247 PFVTFKLAKGSIH-ETKMLGGYNFENIATALTVGVFFGVEENIAATAICAYTP--GNMRS 303

Query: 323 QLATNGMR-VIDDTYNANQSSICAAIDLLKSFEGR--KVLVLGDIAELGDWAEQSHREVG 379
           QL       ++ D YNAN SS+  AI       G+  K+++LGD+ ELGD   + H+++G
Sbjct: 304 QLIEKRSNLIVLDAYNANPSSMEQAIRTFGKMTGKPHKMVILGDMYELGDNTVEEHKKLG 363

Query: 380 AYAAGKVDALYAVGPNMAHAVSVFGPGARHFVTQAELIQALTAAEHDKHTTILIKGSRSA 439
            + +            +  +  +  P A +F     L   L  ++ + H  ILIKGSR  
Sbjct: 364 EWVSEYDIEKVCFTGELTQSALLKAPRALYFPDPFSLRNWLADSKLEDH-LILIKGSRGM 422

Query: 440 VMENVV 445
            +E +V
Sbjct: 423 KLEGLV 428