Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 820 a.a., alanine racemase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  141 bits (355), Expect = 9e-38
 Identities = 133/463 (28%), Positives = 211/463 (45%), Gaps = 26/463 (5%)

Query: 1   MLKAMKFSELTQALSARVLSSDC--SFDGVSIDSRNIKPGQ--LFVALTGPRFDGHDYLN 56
           M+ A+   EL    + ++L      S   +S DSR I  G+  LFVAL G + +GHDYL 
Sbjct: 1   MVNALTLQELLLITNGQLLHQGHHPSVTAISTDSRKIYHGKQTLFVALKGFKVNGHDYLM 60

Query: 57  EVAAKGAVGALVQRAVADSTLPQLLVADTRLALGQLGAL---NRAAFTNPVAAITGSSGK 113
           +  +KG    +V+     S L    +   + AL  L AL   NR  F+  V  ITGS+GK
Sbjct: 61  DAFSKGVRTFIVENDKHISPLTDCTIIVVKSALEALQALAKWNRNQFSGVVIGITGSNGK 120

Query: 114 TTVKELLAGVLRTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTV 173
           T +KE L  +L +R  +  +  + N+  G PL++  +   H AA+IE G S  GE+A   
Sbjct: 121 TIIKEWLGQILASRFDIAKSPKSYNSQTGVPLSIFGIENHHKAAIIEAGISLPGEMAKLQ 180

Query: 174 ALTKPHVVVINNAGTAHVGEFGGP-----EKIVEAKGEILEGLDASGIAVLNLDDKAFET 228
            + +P++ ++ N GTAH   F        EK++  K   L        A+       F +
Sbjct: 181 TIIQPNIGIMTNIGTAHAEGFSSQAEKLHEKLLLFKDAQLIVYRKDHAAIHRALTDQFPS 240

Query: 229 WRVRAAGRKVLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVAN 288
            R+ +   +      L+   +   S +T+       FT H+   +E    NL   H +  
Sbjct: 241 DRLVSWSDQPGGDYTLSTKKEKEGSKLTLIKPDLGLFTFHSHFTDEASLENL--RHTI-- 296

Query: 289 ALAAAAAAYALGVSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDDTYNANQSSICAAID 348
                 AA  LG+S   I   +  +  V+ R   +   +   +IDDTYN + + +  A++
Sbjct: 297 -----VAALVLGLSETQIQQSIPVLDTVEMRLTLKAGIHQCLLIDDTYNNDLAGLDIALE 351

Query: 349 LLKSF--EGRKVLVLGDIAELGDWAEQSHREVGAYAAGKVDALYAVGPNMAHAVSVFGPG 406
            L S   + RK+L+L D+ + GD +          +  ++D ++AVG ++    +     
Sbjct: 352 FLNSQRPKKRKILILSDLLQAGDKSSVYDSVSNLISHYQLDMVFAVGSDIGQLKAPPSCT 411

Query: 407 ARHFVTQAELIQAL-TAAEHDKHTTILIKGSRSAVMENVVAAL 448
              F   A L++ L T A  D    ILIKG+R    E VV AL
Sbjct: 412 VNFFRDTAHLLEKLPTYALQD--DLILIKGARIFQFERVVDAL 452