Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 487 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 76/351 (21%), Positives = 134/351 (38%), Gaps = 26/351 (7%)

Query: 2   LKAMKFSELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAK 61
           +K +K      +L++     + +   +  DSR ++ G +FVA  G + DGH Y+++  A 
Sbjct: 1   MKTLKDILYNVSLTSTTGDMEVAVKDIVFDSRKVEEGDVFVATKGTQVDGHAYIDKAIAS 60

Query: 62  GAVGALVQRAVAD--STLPQLLVADTRLALGQLGA--LNRAAFTNPVAAITGSSGKTTVK 117
           GA   + +    +    +  + V D+  ALG + +   +  +    V A+TG++GKTT  
Sbjct: 61  GAKAIVCEALPGELPKGITYVQVVDSAKALGIMASNFFDHPSAQLKVVAVTGTNGKTTCV 120

Query: 118 ELLAGVLRTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGE-IAYTVALT 176
            LL  +    G +      + N     +         + A+  L A  V E   +     
Sbjct: 121 TLLHRLFMELGYMVGMLSTVENKINDEVIAATHTTPDSVAINRLMAKMVAEGCTHCFMEA 180

Query: 177 KPHVV-------------VINNAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDD 223
             H +             V  N    H+   G  ++ ++AK ++ + L     A++N DD
Sbjct: 181 SSHAIVQERMAGLQLSGAVFTNISHDHLDYHGTFDEYIKAKKKLFDELPKGAFALVNADD 240

Query: 224 KAFETWRVRAAGRKVLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGN 283
           K            K  TF  L    DF A  ++   +G     L            ++G 
Sbjct: 241 KRGMVMMQNTKASK-RTFG-LKYPTDFKAKVLSNTLQG-----LELDLNGRQAWFRMIGE 293

Query: 284 HNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDD 334
            N  N  +    A  LG     +   L +++  +GR   QL   G+  I D
Sbjct: 294 FNAYNITSVLGVALLLGEEEEEVLMQLSSIKGAQGR-FDQLHVEGITAIVD 343