Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 449 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 27/274 (9%)

Query: 104 VAAITGSSGKTTVKELLAGVLRTRGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGA 163
           V AITG++GKTT   L   +++T G      GN+   + + L    +  +H   V+E+ +
Sbjct: 104 VIAITGTNGKTTTAMLTYHLMKTGGLDVGLGGNVGQSWASQL----VQGDHDWWVLEVSS 159

Query: 164 SRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGP-EKIVEAKGEILEGLDASGIAVLNLD 222
            ++          KP V V+ N    H+  +    +  V++K  +L+ +D     +   +
Sbjct: 160 FQIDGFRSL----KPKVAVLTNITPDHLDRYDYKMDHYVQSKLGLLKQMDEEDDFIYYRE 215

Query: 223 DKAFETWR------VRAAGRKVLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHV 276
           D+   TW+      VR    ++    +      F+ + + ++ R   +  +  P+     
Sbjct: 216 DQ--HTWQGMSQINVRPKIHEISLETIGKDGGLFNGTEVKLNFR---NHMISIPER---- 266

Query: 277 QLNLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDDTY 336
           ++ + GNHN+ N + A+ AA   G+S   +  GL   +    R        G+  I+D+ 
Sbjct: 267 EMAMKGNHNMLNVMCASTAALLAGISEEALKAGLADFKNAPHRMELVRELEGVTFINDSK 326

Query: 337 NANQSSICAAIDLLKSFEGRKVLVLGDIAELGDW 370
             N   + A +  L +F+   + + G + +  D+
Sbjct: 327 GTN---VDATVYALSTFKEPLIWIAGGVDKGNDY 357