Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 470 a.a., UDP-N-acetylmuramate--L-alanine ligase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 87/324 (26%), Positives = 136/324 (41%), Gaps = 29/324 (8%)

Query: 49  FDGHDYLNEVAAKGAVGALVQRAVADSTLPQLLVA-DTRLALGQ----LGALNRAAFTNP 103
           F GHD  +       V A+V      +  P++  A + R+ L +    L  L R  F+  
Sbjct: 61  FIGHDAAH---VGEGVSAVVYSTAVKADNPEMKAARERRIPLVRRAEMLAELMRLQFS-- 115

Query: 104 VAAITGSSGKTTVKELLAGVLRTRG-PVHATRGNLNNDFGAPLTLLELAPEHTAAVIELG 162
             A+ G+ GKTT   ++A +L   G       G + N +G    +     +    V+E  
Sbjct: 116 -IAVGGTHGKTTTTSMVAALLDAAGLDPTVVNGGIINAYGTNAKV----GDGDWIVVEAD 170

Query: 163 ASRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLD 222
            S    +       K  V ++ N    H+  +G  + + +A  + +E +   G A + LD
Sbjct: 171 ESDGSFLRL-----KSTVAIVTNIDPEHLDHYGDFDGVRKAFIDFVENIPFYGFAAVCLD 225

Query: 223 DKAFETWRVRAAGRKVLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHV----QL 278
               +        R+++T+ V N  A   A N+ +   GC  F +    G  HV     L
Sbjct: 226 HPEVQKLVAAIDNRRLVTYGV-NPQAMVRADNVEMGPDGC-RFDVVIQNGETHVISGVHL 283

Query: 279 NLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDDTYNA 338
            + G HNV+NALAA A A  L VS   I TGL     VK R        G+R+IDD Y  
Sbjct: 284 PMAGWHNVSNALAAIAVARELDVSDDAIRTGLAGFGGVKRRFTTTGVVGGVRIIDD-YGH 342

Query: 339 NQSSICAAIDLLKSF-EGRKVLVL 361
           +   I A +   +   +GR + V+
Sbjct: 343 HPVEIAAVLKAARQVTDGRVIAVV 366