Pairwise Alignments

Query, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

Subject, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

 Score =  216 bits (550), Expect = 1e-60
 Identities = 142/386 (36%), Positives = 204/386 (52%), Gaps = 17/386 (4%)

Query: 27  GVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAAKGAVGALVQRAVADS----TLPQLLV 82
           G+SIDSR +K G+ F A+ G R DGHDY +   A GA   +V  A   +    T+P ++V
Sbjct: 28  GISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALGRLTVPMIVV 87

Query: 83  ADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELLAGVLRTRGPVHATRGNLNNDFG 142
            D   ALG+L    R   +  + A+TGS GKTT KE+L   L   G VHA   + NN +G
Sbjct: 88  EDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVASFNNHWG 147

Query: 143 APLTLLELAPEHTAAVIELGASRVGEIAYTVALTKPHVVVINNAGTAHVGEFGGPEKIVE 202
            PLTL  +  +    V E+G +  GEI   V + +PHV +I     AH+G F   E+I  
Sbjct: 148 VPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIITTIAPAHLGNFKNIEEIAA 207

Query: 203 AKGEILEGLDASGIAVLNLDDKAFETWRVRA--AG-RKVLTFAVLNAAADFHASNITVDA 259
           AK EI EG++  G  +LN D+  FE     A  AG   +LTF   +A ADF  ++     
Sbjct: 208 AKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGIEHILTFG-QHAKADFRLADFESTT 266

Query: 260 RGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGIATGLGAVQPVKGR 319
            G   + +   + +E + +N+ G H   NA+A   A    G +L      LG ++ VKGR
Sbjct: 267 TGSTIWAILNGETSE-LHINIPGRHIADNAMAVLGAVAVTGANLDRALEALGTLEAVKGR 325

Query: 320 TVA-QLATNG--MRVIDDTYNANQSSICAAIDLLKSFE----GRKVLVLGDIAELGDWAE 372
                L  NG    +ID++YNAN +S+ AAI +L   E    GR+V VLGD+ E+G+++ 
Sbjct: 326 GQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETETQGHGRRVAVLGDMLEMGEFSA 385

Query: 373 QSHREV-GAYAAGKVDALYAVGPNMA 397
           Q H E+ G   A  ++ ++  G  MA
Sbjct: 386 QLHEELAGPLLAAGIEHVWLAGEAMA 411