Pairwise Alignments

Query, 581 a.a., cell division protein from Pseudomonas simiae WCS417

Subject, 662 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  165 bits (418), Expect = 5e-45
 Identities = 164/609 (26%), Positives = 259/609 (42%), Gaps = 90/609 (14%)

Query: 12  RFRLMLGLLALMV----GAIAWRIIDLQVVDRDFLIGQGDARSLRHIPIPAHRGLITDRN 67
           RFR  + ++  +V    G I  R+  LQVV  + L  + ++     +PI  +RG I DRN
Sbjct: 13  RFRRRVVVVGCVVLFGFGLIGARLAFLQVVRHEELADRAESNRTAIVPIVPNRGQILDRN 72

Query: 68  GEPLAVSTPVTTLW---ANAKELQVAKDRWPALAAALGQDPKALAERLEAQANKEFIYLV 124
           G  LA +    TL    +   +L  A D   A+      D +      E   + + I + 
Sbjct: 73  GVVLASNYAAYTLEITPSKVGDLNAALDELDAIVEITPNDRRRFKRLREDSRSFDSIPIR 132

Query: 125 RGLTPEQGQQVLD--LKVPGVYGIEEFRRFYPAGETTAHMVGFT------------DIDD 170
             L+ E+  +      + PG+       R YP GE  +H++G+             D D+
Sbjct: 133 TRLSDEEVARFAAQRYRFPGIEIKARLFRSYPHGEVASHVIGYIGRINQREKTAMEDWDE 192

Query: 171 H-----------GREGVELAYDEWLAGVPGKRQVIKDRRGRLIKDVQVTKNAKAGKPLAL 219
                       G+ G+E +Y++ L G  G  Q+     GR ++ +     A  G  + L
Sbjct: 193 EEQANYRGTDYIGKLGIEQSYEKTLHGQTGVEQMETSAGGRAVRRL-ARHPATPGNTVML 251

Query: 220 SIDLRLQYLANRELRNAIIENGAKAGSLVIMDVKTGEILAMVNQPTYNPN------NRRN 273
           S+D++LQ L            G + G+LV +D KTGEILA V++PT++PN      +  +
Sbjct: 252 SLDIKLQKLVEDMF-------GERRGALVAIDPKTGEILAFVSKPTFDPNLFVEGIDHES 304

Query: 274 LQPAM------MRNRAMIDVFEPGSTMKAISMSAALETGRWKPSDKVEVYPGTLQLGKYT 327
               +      + NRA+   + PGST K     AALETG  + +DK+E  PG+   G  T
Sbjct: 305 WAALIESIDKPLLNRALRGTYPPGSTYKPFMALAALETGA-RAADKIENDPGSYSFGGRT 363

Query: 328 IRDVSRTEGPVLDLTGILINSSNVGMSKVAFDIGGETIYHLAQKIGLGQPTGLDFPGERV 387
                   G V D+   +  SSN     +A ++G + I+     +G GQ TG+D  GE  
Sbjct: 364 FLSHRGGLGGV-DMHRAIQFSSNTYFYSLANEMGVDLIHEFMAPLGFGQFTGIDLLGESR 422

Query: 388 GNL------------PNYRDWKKAETATLSYGYGL-SVTAIQLAHAFSVLANNGRMVPLS 434
           G L            P+ + W   ET +L  G G  S T +QLA A + LAN G      
Sbjct: 423 GVLPSKAWKRAAYRRPDMKTWHAGETISLGIGQGYNSFTMLQLASANATLANGGMHYRPH 482

Query: 435 LIHVDEAPKATQVIPENVAKTMQ-GMLQQVIEAPRGVFRAQV-----------PAYHVAG 482
           L+   +     +++ +   +    G  Q+ ++  R    A              AY  AG
Sbjct: 483 LVRAIKDTVTEEIVAQVQPQARDLGYAQKHVDVVRNAMVAVTKGGTGTRVFAGAAYTSAG 542

Query: 483 KSGTARKTSVGTKGYAENSY-------RSLFAGFGPMSDPRYAIVVVIDEPSKAGYFGGL 535
           K+GTA+  S+G K  A            +L+  F P   P  A+  +++       FG  
Sbjct: 543 KTGTAQAVSLGPKARASGKALEERQRDHALYMAFAPAEAPTIAVAAIVENAG----FGAA 598

Query: 536 VSAPVFSKV 544
            +AP+  +V
Sbjct: 599 HAAPIVRRV 607