Pairwise Alignments

Query, 603 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Sphingobium sp. HT1-2

 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 86/378 (22%), Positives = 150/378 (39%), Gaps = 62/378 (16%)

Query: 222 RAQNPGHPAAVQLPTPLTKLKELASQPLT-KIALLLPQDGPLASVGKALREGFMAAHYQA 280
           +   P  P     PT     + L +     ++ALL+P  GP A VG+++      A    
Sbjct: 40  KGPGPAQPTGPAKPTGPEVTQGLPTDTARHRVALLVPTSGPNAGVGQSIANATTLALMDI 99

Query: 281 EQAGQKPPVIEFYDSSRLTSLDDFYAKAQAA------GVQLVVGPL---EKPLVKQLSAR 331
           +            D  R+T+ D     A AA      G +L++GPL   +  +V  ++A+
Sbjct: 100 KT-----------DKVRITTYDTATGAAAAANRALADGNRLILGPLLADDARIVGPIAAK 148

Query: 332 PQLPITTLALNYSESDRSPAQLFQFGLAAEDEAREVSRRARADGLHRAAAMVPRGEWGER 391
             +P+ + +   +++  + + +F  G         V   AR  GL    A+VPRG +GER
Sbjct: 149 ANVPVISFS---NDTSVAGSNIFLMGYTPNQSIERVIGFAREKGLSNFGALVPRGTYGER 205

Query: 392 VYKAFRQDWEANGGQVMGVEYVDQ-PVALAQQIADLFQLRKSEGRAKSLQSTVGTDVAAQ 450
              A  +  E  GG V+ ++  D+ P ++   +             K LQ++   D    
Sbjct: 206 AGNALLRAVEQAGGTVVSMQTFDRTPASITAAV-------------KKLQASSSYDA--- 249

Query: 451 PSRRQDIEFIFLAVTPQLAQQIKPTLNFQYAGDVPVYATSHVFSASGDKNQYLDMTNVMF 510
                    + +A + ++A Q+ P +      +  +  T        +  + L  + V+ 
Sbjct: 250 ---------LLIADSGRVALQVAPIVRKNGGANARLLGTE-----IWNTEESLAASPVL- 294

Query: 511 CETPWLLNTTDPLRNQVAAQWPQANGSLG-RLYAMGVDAYRLAPRLGQ----LKALPDTR 565
               W  + +D L  Q+A ++    GS   RL +MG DA  L  R+ Q        P  R
Sbjct: 295 -RGAWYASVSDGLYRQLATKYRTRYGSAPFRLSSMGYDAVLLTVRIAQDWKPGAPFPTAR 353

Query: 566 VDGLSGSLGISTTQRVDR 583
           +    G  GI    R +R
Sbjct: 354 LRDPGGFAGIDGAFRFNR 371