Pairwise Alignments

Query, 603 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 683 a.a., penicillin-binding protein activator from Dickeya dianthicola ME23

 Score =  115 bits (287), Expect = 8e-30
 Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 19/321 (5%)

Query: 290 IEFYDSSRLTSLDDFYAKAQAAGVQLVVGPLEKPLVKQLSARPQLPITTLALNYSESDRS 349
           ++ YD+S  T L +  A+AQ  G   +VGPL K  V+QL  R    +  LALN  E  + 
Sbjct: 363 VKVYDTSNQT-LANVIAQAQKDGATTIVGPLLKNEVEQLP-RLNPSLNVLALNQPEQVQP 420

Query: 350 PAQLFQFGLAAEDEAREVSRRARADGLHRAAAMVPRGEWGERVYKAFRQDWEANGGQVM- 408
              +  F L+ EDEA + +      G      + PRG  G+RV  AF + W+   G V+ 
Sbjct: 421 NPNICYFALSPEDEAADAAEFIHKQGKQHPLILAPRGNLGDRVVAAFAKSWQQQSGGVVL 480

Query: 409 -----GVEYVDQPVALAQQIADLFQLRKSEGRAKSLQSTVG-------TDVAAQPSRRQD 456
                GV  + Q +     +A   Q   +   A S  +TVG           A  +   +
Sbjct: 481 QQRTGGVYDLKQAINSGAGLALNGQPVITATSAPSSSTTVGGLTIPNQAPPIANVTSDGN 540

Query: 457 IEFIFLAVTPQLAQQIKPTLNFQYAGDV--PVYATSHVFSASGDKNQYLDMTNVMFCETP 514
           ++ +++  TP     IKP ++ +  G +   +YA+S  + A    +   +M  + F + P
Sbjct: 541 VDAVYIIATPDELTLIKPMIDMRNKGALHPALYASSRSYQAGLGPDFRFEMEGLQFSDIP 600

Query: 515 WLLNTTDPLRNQVAAQWPQANGSLGRLYAMGVDAYRLAPRLGQLKALPDTRVDGLSGSLG 574
            L   +  L  QV+ Q+ + + SL RL+AMG+DA++LA    QL   P   + G +G L 
Sbjct: 601 LLTGASPALMQQVSTQF-RNDYSLVRLFAMGMDAWKLASNFAQLHQ-PGNSLSGATGVLS 658

Query: 575 ISTTQRVDRQMPWAKFVGGEI 595
            S    V+R++ W +F  G++
Sbjct: 659 TSPDCVVNRKLTWLQFRQGQL 679



 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 84/289 (29%), Positives = 125/289 (43%), Gaps = 26/289 (8%)

Query: 6   RLLSALCLAALLAACASSPSSSLGDLPRT-----PDASIEQLLEQATTAKTPEKAALLRL 60
           RL+  +  A  LA C S      G  P+        AS +  L+Q   +    KA    L
Sbjct: 13  RLIPVMLAALFLAGCPSQAPQ--GTAPQQHVEGKAGASSDYYLQQMQQSGDDSKADWQLL 70

Query: 61  SAADMAYKQNNPGRSSQILAQVSLDVLKPAAQVFASTLAAELAMARNQPKAALTALNHPS 120
           +   +  +   P  + Q+ A      L    +     L AELA+A+N   AA + L   +
Sbjct: 71  AIHALIQEGKLPQANGQLNALSPQ--LNDKQRQEQRLLLAELAVAQNDLNAANSTL---A 125

Query: 121 LQSLKDLPPEQQIRTASVHARAYEADGQTLAAARERVAMAPLLTGDAAKSNHEAIWVLIA 180
              +K L P+QQ R      +A + +  +L   R  + + PLL GDA + N +  W  + 
Sbjct: 126 QLDVKSLSPQQQERYYQTQIKAAQ-NRPSLTMIRAYIGLEPLLQGDAHQRNIDQTWAALT 184

Query: 181 ALPAEQLQAS----GNPTLDGWITLAQAVKGAGTLEQQ-QAAIDTWRAQNPGHPAAVQLP 235
            L  + L A        TL GW+ L    +    +    QAAI+ W+ + P HPAA QLP
Sbjct: 185 RLTQQDLGAMVINVDENTLQGWLDLLNLWQTKAQVPTDLQAAIEDWKKRYPRHPAAKQLP 244

Query: 236 TPL--------TKLKELASQPLTKIALLLPQDGPLASVGKALREGFMAA 276
           + L        T+  E A      IALLLP +G   +   A+++GF AA
Sbjct: 245 SQLGGTPPVAATQPGENAPVGGNAIALLLPLNGQAQTFANAIQQGFSAA 293