Pairwise Alignments

Query, 909 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 901 a.a., HTH-type transcriptional regulator MalT from Escherichia coli ECRC100

 Score =  213 bits (542), Expect = 4e-59
 Identities = 239/939 (25%), Positives = 388/939 (41%), Gaps = 99/939 (10%)

Query: 18  LEGRFYRPPLPDGYVLRPRLCERLSAGLEGRLLLVSAPAGFGKSSLAVEFCQSLPAHWQS 77
           +  +  RP   D  V+R RL  +LS     RL L+++PAG+GK++L  ++          
Sbjct: 3   IPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKN---DI 59

Query: 78  LWLGLSPRDNDPGRFLERLLDGLQQFFPQLGAQSLGLLKMRQRHQPFAFEEWLDGLLDEL 137
            W  L   DN   RF   L+  +QQ              M Q+ Q  +       L  EL
Sbjct: 60  GWYSLDEGDNQQERFASYLIAAVQQ---ATNGHCAICETMAQKRQYASLTSLFAQLFIEL 116

Query: 138 AVHLSTRAPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLVVLVTSRQRPDWHLARLRLS 197
           A      +PL LV+DDYHL   PV+   ++FF+ H P+ L ++V SR  P   +A LR+ 
Sbjct: 117 A---EWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVR 173

Query: 198 RHLLELHEQDLRLTHDESLAVLD-RHSNSLQGEALDNLIRRSEGWVAGLRFWLLAASEAG 256
             LLE+  Q L  TH E+    D R S+ ++      +     GW   L+  L+A S   
Sbjct: 174 DQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQ--LIALSARQ 231

Query: 257 GDGALPQSLHGGEGL----IRDYLLEEVIDCLPADVQAFLYDTAPQDRFCSELCDAVREA 312
              +  +S     G+    + DYL++EV+D +    + FL  +A        L   V   
Sbjct: 232 NTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGE 291

Query: 313 HDSAEILRYLQAHQVFLVPLDDQGHWYRYHHLFSDLLRTRRASSHVLPAASLHLRACRWF 372
            +    L  ++   +FL  +DD G W+ YH LF + LR R           +H  A   +
Sbjct: 292 ENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESW 351

Query: 373 NAQGLIDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPR 432
            AQG   EA+  AL AG   +  +++ N     L     + +L      LP   L+  P+
Sbjct: 352 MAQGFPSEAIHHALAAGDALMLRDILLN-HAWSLFNHSELSLLEESLKALPWDSLLENPQ 410

Query: 433 LIVLYSWALGLACQLDAAEELSSYLSRFLPAPSATAQKSMLAQWLALSGIIARGRGDREL 492
           L++L +W   L        E+++ L+R         + +M A++ AL   +A   G+ + 
Sbjct: 411 LVLLQAW---LMQSQHRYGEVNTLLARAEHEIKDIREGTMHAEFNALRAQVAINDGNPDE 467

Query: 493 TQRYCSEALESLPQRRYGQRLMCLSTLSNLAIVDADLWRARGLNRESLELAQRVGNPLFE 552
            +R    ALE LP   +  R++  S L  +     +L R+  L +++ ++A++     + 
Sbjct: 468 AERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 527

Query: 553 ALAHYDRARVLQARGEILRSLDEVRQGLQRLHGLAPQRLYAVRARLSLYEGFLLLVRLQP 612
             +   ++ +L A+G +  + +   +  Q ++    Q L     +L ++E    LVR++ 
Sbjct: 528 LWSLIQQSEILFAQGFLQTAWETQEKAFQLIN---EQHL----EQLPMHE---FLVRIRA 577

Query: 613 DAGLARLRAGLAEARACRDISVLIGH---------CVIANFEGRRGDFPKAFAELAEAER 663
               A  R   AEA A   I VL  +          ++      RGD   A ++L   E 
Sbjct: 578 QLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLEN 637

Query: 664 LMHIWDVPPIYYLAMITLIKCELWLAQGRTDLADAWLTRLGQTYHGEHAAAAPEF---HP 720
           L+         +++    ++   W   G    A  WL             A PEF   H 
Sbjct: 638 LLGNGKYHS-DWISNANKVRVIYWQMTGDKAAAANWLRH----------TAKPEFANNHF 686

Query: 721 HLPQHIGLQQAALDATRHQPAAALQRLEELALQAHNSGRQMIALMALTQRVQLLLEE--- 777
              Q   + +A +     +PA       E+ L+  N   + + LM+   R  LLL +   
Sbjct: 687 LQGQWRNIARAQILLGEFEPA-------EIVLEELNENARSLRLMSDLNRNLLLLNQLYW 739

Query: 778 --GQETKARSVFTQALE-AGIGGALQPF----------------------------QRLL 806
             G+++ A+ V   AL+ A   G +  F                            QR+L
Sbjct: 740 QAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRIL 799

Query: 807 ETHPDWMREQLAKDPHGLLSQSLLALLPAVVVVEAASTHETLSARELAVLQLIAQGCSNQ 866
                  R + A      + +    LL    V E   T   L+ RE  VL LI  G SN+
Sbjct: 800 REINQHHRHKFAHFDENFVER----LLNHPEVPELIRT-SPLTQREWQVLGLIYSGYSNE 854

Query: 867 EISNRLFISLHTVKTHASHINSKLGVERRTQAVARAQEL 905
           +I+  L ++  T+KTH  ++  KLGV  R  AV  AQ+L
Sbjct: 855 QIAGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKL 893