Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 522 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  166 bits (419), Expect = 3e-45
 Identities = 138/506 (27%), Positives = 227/506 (44%), Gaps = 45/506 (8%)

Query: 45  TYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVIHTINVRLSP 104
           T+  L  RV  L     + G+  GD VAV   D    +E ++A   +GA+   +N R + 
Sbjct: 31  TWKELDRRVDALVAAFKKKGLAKGDVVAVCVADGPVQIEVIYAAARLGAIRVGLNYRFAA 90

Query: 105 EQILYTMNHAEDRFVLVNSEFVGLYQAIAGHLTTVDKTLLLTDGDSKTAELPNLVGEYES 164
             I   + H+  RF +  +    L    +  L  VD      DG  +       +GEYES
Sbjct: 91  TDIQKLVAHSGARFAIAETGCRNLLDGCSIELGIVDAG----DGQGE-------LGEYES 139

Query: 165 LLAAASPKYDFQDFDENSVATTFYTTGTTGNPKGVYFTHRQLVLHTIGVATI-MGSVDSV 223
           +L   +P +       + VA   YTTG+TGNPKG  + HR +V H +G   + +G     
Sbjct: 140 MLDFEAPAHS-GPVAGSDVAQICYTTGSTGNPKGAVWLHRSVV-HAMGFTLLDIG----- 192

Query: 224 RLLGTNDVYMPITPMFHVHAWGLPYVAT----MLGLKQVYPGRYDPEYLVELWRKEKVTF 279
             L   DVY+   P     A G+P V      MLG   V   R+  +  ++L  + + T 
Sbjct: 193 --LSEEDVYLHCLP-----AAGVPSVLATWNVMLGFTTVVMPRFQADLALDLMERHRCTS 245

Query: 280 SHCVPTILQMVLNAKAAQGVDFGGWKIVIGGSALN--RTLYEAAKA-RGIQLTAAYGMSE 336
           +  +PT+L  V      +  D    + ++ GSA      +    K   GI+    YG +E
Sbjct: 246 TLLIPTMLTAVCEEAERKPRDVSSMRKILYGSASTPPALIRRGGKVFEGIEFEQIYGSTE 305

Query: 337 T--GPLVSCAHLNEELMAGTEDERITYRIKAGVPGPLVEAAIMDAEGNFLPADGESQGEL 394
              G     +  +      + D+ ++     G P       I D +G+  P +    GE+
Sbjct: 306 GAGGWFTKLSATDHRRALESNDDLLS---SCGKPTIHARVQIRDDDGH--PCETGQVGEI 360

Query: 395 VLRAPWLTEGYYNEPQKGAELWAGGWMHTGDVATLDAFGVIDIRDRIKDVIKTGGEWISS 454
            +   ++ EGYY E +   +    GW+HTGD+  LD  G + + DR + +I TGG  +  
Sbjct: 361 CVAGDFVMEGYYKEEELTRKTLKDGWLHTGDMGRLDENGYLYLVDRKQFMIITGGYNVYP 420

Query: 455 LALEDLVSRHPAVREVAVVGIADPQWGERPFALLVVRDGHVIGARELKEHLKPFVELGHL 514
           + +E++++ HP V E  V G+ D +WGE   A++VVR G  + A ++K+  K       L
Sbjct: 421 IEVENVIAAHPDVLETCVFGVPDEKWGEAVHAVIVVRPGTTLHAEDVKDWCKT-----RL 475

Query: 515 SKWAIPSQIAVVTEIPKTSVGKLDKK 540
           +++  P  I     + + + GK+ K+
Sbjct: 476 AQFKRPKSIEFREALMRGATGKIQKR 501