Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  159 bits (401), Expect = 3e-43
 Identities = 144/533 (27%), Positives = 234/533 (43%), Gaps = 53/533 (9%)

Query: 28  ARYEKTREIVYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFA 87
           AR    R  +   + R +Y  L     R A+ L + G++ G+ V ++  +S + +  M  
Sbjct: 36  ARRFGERTALIEGEHRLSYRALDAASNRFAHHLLDLGLEKGERVGMLCNNSIQMVVAMLG 95

Query: 88  IPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNS------EFVGLYQAIAGHLTTVDK 141
           I   G V   IN  L  E I Y ++HAE R V++++      E   L QA     T V  
Sbjct: 96  IQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTALHAKPELRELLQA-----TGVSP 150

Query: 142 TLLLTDGDSKT---AELPNLVGEYESLLAAASPKYDFQDFDENSVATTFYTTGTTGNPKG 198
            L + DGD+     A +P  + +    L   +        D   +A   YT+GTTG  KG
Sbjct: 151 LLCVLDGDAPPPGIATVPQAIAQGPETLPDVA-------IDSADLALIMYTSGTTGRQKG 203

Query: 199 VYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVHAWGLPYVATMLGLKQV 258
           V  +H  +  H++ ++ ++    S       DV+  + P+FH     +   A  +G   V
Sbjct: 204 VMHSHASV--HSVLLSNMVEWGSSPERA---DVWSSVLPLFHCGQHTVLMSALAVGGALV 258

Query: 259 YPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFGGWKIVIGGSA-LNRTL 317
               +DP  ++    + K+T    +P +   +L        D    ++ +   A ++RTL
Sbjct: 259 VLRGFDPGAVLAAIERHKITVMVGLPMMYGALLAHPQRAARDLSSLRLCVYAMAPMSRTL 318

Query: 318 YEAAKARGIQLTAAYGMSETGPLVSCAHLNEELMAGT-----EDERITYRIKAGVPGPLV 372
                   ++L     + E  P  +      E+  G       ++R  +    GV   + 
Sbjct: 319 L-------LRL-----LDEFCPNFALVSGQTEMYPGATIFEAHEQRRRFGSYWGVGTLVN 366

Query: 373 EAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAELWAGGWMHTGDVATLDAF 432
           E A+M  +G  L  D    GE+V R P +  GYY +P+  A     GW H+GD+  +D  
Sbjct: 367 EVAVMGDDGELLGTD--QVGEIVFRGPNVMLGYYKDPEATAHAQRFGWHHSGDLGRMDED 424

Query: 433 GVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGIADPQWGERPFALLVVRD 492
           G +   DR+KD++K+GGE + S+ +E+++ RHP V   AVVG+    WGE   A +  R 
Sbjct: 425 GQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITAFVTRRP 484

Query: 493 GHVIGARE--LKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRIR 543
                  E  L  H K      HL  + +P QI  +  +P TS GK+ K  +R
Sbjct: 485 DAPADFTEAVLTAHCKE-----HLGGFEVPKQIIFLPALPMTSTGKIQKFELR 532