Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 541 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

 Score =  308 bits (790), Expect = 3e-88
 Identities = 182/537 (33%), Positives = 290/537 (54%), Gaps = 25/537 (4%)

Query: 17  PLLIKRLLMSGARYEKTREIVYRDKL----RYTYPTLIERVARLANVLTEAGVKAGDTVA 72
           PLL+  L+   ARY     +V  +        T+  +     RL++ L + GV++G+  A
Sbjct: 4   PLLVSSLIAHAARYHADTPVVSVNTTGGIEHTTWGQVEINARRLSSALAKLGVQSGERCA 63

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYQAI 132
            + W++ R+LE  + +   G V HT+N RLS E ++Y +NHA+D+ + ++  F+ +   +
Sbjct: 64  TIAWNNRRHLEIYYGVSGAGMVCHTVNPRLSAETLIYIVNHADDQVLFIDRTFLPIVAKL 123

Query: 133 AGHLTTVDKTLLLTDGDSKTAELPNLVGEYESLLAAASPKYDFQDFDENSVATTFYTTGT 192
              L+TV   +L+   D + + + + +  Y+ ++A+    Y +   DE+  ++  YT+GT
Sbjct: 124 RSALSTVKHVILMGPRDEEASGMLDGLRFYDEVVASGDADYPWPSIDEDLPSSLCYTSGT 183

Query: 193 TGNPKGVYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVHAWGLPYVATM 252
           TG+PKGV ++HR  VLH +   +  G   S R     D  MP+ PMFHV+AWG+PY+A  
Sbjct: 184 TGHPKGVLYSHRSTVLHALAGNSPDGIGVSAR-----DAVMPVVPMFHVNAWGVPYIAAA 238

Query: 253 LGLKQVYPG-RYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFGGWK-IVIGG 310
            G K V PG   D   L  L   E+V  +  VPTI   +L A  A+G      K  ++GG
Sbjct: 239 QGAKLVLPGPNLDGPSLATLIDDEEVGLALGVPTIWMGLLAALRARGTKPKSLKRTIVGG 298

Query: 311 SALNRTLYEAAKAR-GIQLTAAYGMSETGPLVSCAHLNEELMAGTE---DERITYRIKAG 366
           +AL  +++ A +   G++L  A+GM+ET PL     LN+ L          +   R+  G
Sbjct: 299 AALPPSMFAAFRDEFGVELIHAWGMTETSPL---GTLNQPLARHIHLDPQRQSEVRLGQG 355

Query: 367 VPGPLVEAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAELWAGGWMHTGDV 426
            P   V+  ++D  G  LP DG+S G+L +R  W+   Y+    + + L + GW  TGD+
Sbjct: 356 RPPYGVQLRVVDDGGAVLPNDGKSPGKLQIRGHWIVSSYFG--AESSALTSDGWFDTGDI 413

Query: 427 ATLDAFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGIADPQWGERPFA 486
           ATLDA G + IRDR KD+IK+GGEWISS+ +E++   HPA+   A +G+  P+W ERP  
Sbjct: 414 ATLDANGYMVIRDRAKDIIKSGGEWISSVDIENIAIGHPAIANAAAIGVPHPKWDERPVL 473

Query: 487 LLVVRDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRIR 543
           + V ++G  +   +L    K     G L  W IP +   +  +P +  GK+ K R+R
Sbjct: 474 VAVKKEGANVSEADLLAFFK-----GRLPDWQIPDKAVFIDALPLSGTGKVFKNRLR 525