Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  227 bits (578), Expect = 1e-63
 Identities = 152/533 (28%), Positives = 265/533 (49%), Gaps = 33/533 (6%)

Query: 18  LLIKRLLMSGARYEKTREIVYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTVAVMDWD 77
           + + + L  G R +     V     R  +    +RVARL  VL + G++ GD V +M  +
Sbjct: 1   MFLTQPLHKGRREKGKAAAVVCGDTRLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLN 60

Query: 78  SHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYQAIAGHLT 137
           SHR++E  F     G VI+ +N+R +P+++ Y+++  + R +LV+  F  +   + G  +
Sbjct: 61  SHRFVEYFFGTWWGGGVINPVNIRWNPKEVAYSLDDCDTRILLVDDVFAPMAAELRGLSS 120

Query: 138 TVDKTLLLTDGDSKTAELPNLVGEYESLLAAASPKYDFQDFDENSVATTFYTTGTTGNPK 197
           ++   +   DG      +P  +  YE+LLAA  P  D    D + +A   YT GTTG PK
Sbjct: 121 SLRTVVYCGDG-----AVPEGMVGYEALLAATDPAED-APHDSDELAAVMYTGGTTGQPK 174

Query: 198 GVYFTHRQLVLHTIGVATIM--GSVDSVRLLGTNDVYMPITPMFHVHAWGLPYVATMLGL 255
           GV  TH  L ++ +G    +   + D+  ++          PMFHV   G+   + M  +
Sbjct: 175 GVMLTHGSLCINALGTVAALPRDTQDAAAIVAA--------PMFHVAGCGVALQSLMRLV 226

Query: 256 KQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFGGWKIVIGGSA-LN 314
                  +D   ++   +  ++T    VPT+++ V+        D    +++  G+A ++
Sbjct: 227 PVHVVPVFDELAVLRTLQSARITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPID 286

Query: 315 RTLYEAAKAR--GIQLTAAYGMSETGPLVSC--AHLNEELMAGTEDERITYRIKAGVPGP 370
             L + A     G      YGM+E  P+V+   +H +     G + ER+     AG P P
Sbjct: 287 AALLDQAMRAFPGTAFAQVYGMTELSPVVTALPSHCHAP---GPDRERLLR--SAGTPIP 341

Query: 371 LVEAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAELWAGGWMHTGDVATLD 430
           + E  I+D + N +P      GE+V R P + +GY+N+P++      GGWMHTGD   +D
Sbjct: 342 IAELRIVDGDDNEVPFG--QVGEIVARGPMVMKGYWNKPKETEAALRGGWMHTGDGGYMD 399

Query: 431 AFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGIADPQWGERPFALLVV 490
             G + + DR+KD+I +GGE + S  +E+ +++ P V   AV+G+ D +WGER  A++V 
Sbjct: 400 EEGFVFVVDRMKDMIVSGGENVYSAEVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVR 459

Query: 491 RDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRIR 543
           R+G  + A  +  H +       ++ +  P  +     +P ++ GKL K ++R
Sbjct: 460 REGMALEAEAVIAHCRE-----QIAGYKCPRSVEFRDALPLSAAGKLQKFQLR 507