Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  163 bits (413), Expect = 1e-44
 Identities = 146/538 (27%), Positives = 239/538 (44%), Gaps = 58/538 (10%)

Query: 36  IVYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVI 95
           +V+   LRYT+  L + V + A  L   GV+ GD + +   +   +    FA   +GA++
Sbjct: 38  VVHHQALRYTWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAIL 97

Query: 96  HTINVRLSPEQILYTMNHAEDRFVLV-----NSEFVGLYQAIAGHLTTVDKTLLLTDGDS 150
             IN      ++ Y +  +  R+V+       S++  + Q +   L +     L+ +   
Sbjct: 98  VNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFP 157

Query: 151 KTAELPNLV----------------GEYESLLAAASPKYDFQDFDENSVATTFYTTGTTG 194
           +   + +L                  E  S  A A+ +   +  D  ++    YT+GTTG
Sbjct: 158 ELRGVVSLALSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQ---YTSGTTG 214

Query: 195 NPKGVYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVHAWGLPYVATML- 253
            PKG   +H  ++ +   V   +G  +  RL+      +P+ P++H     +  +  M  
Sbjct: 215 FPKGATLSHSNILNNGYMVGESLGLTEHDRLV------VPV-PLYHCFGMVMANLGCMTH 267

Query: 254 GLKQVYPG-RYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFGGWKIVIGGSA 312
           G   +YP   +DP   +    +EK T  + VPT+    L+       D    +  I   A
Sbjct: 268 GSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGA 327

Query: 313 ------LNRTLYEAAKARGIQLTAAYGMSETGPLVSCAHLNEELMAGTEDERITYRIKAG 366
                 + R + E   A   ++  AYGM+ET P+         L  G  D+        G
Sbjct: 328 TCPIEVMRRVIGEMHMA---EVQIAYGMTETSPV--------SLQTGAADDLERRVTSVG 376

Query: 367 VPGPLVEAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAE-LWAGGWMHTGD 425
              P +E+ ++DAEGN +P  GE  GEL  R   +  GY+N P+  AE + A GWMHTGD
Sbjct: 377 RTQPRLESKVVDAEGNTVPR-GEI-GELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGD 434

Query: 426 VATLDAFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGIADPQWGERPF 485
           +A +D  G + I  R KD+I  GGE I    LE+    HPAV +V V+G+   ++GE   
Sbjct: 435 LAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIV 494

Query: 486 ALLVVRDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRIR 543
           A + +  GH +   EL+E  +       ++ + +P     V E P T  GK+ K R+R
Sbjct: 495 AWVRLHPGHAVSEVELREWAR-----ARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMR 547