Pairwise Alignments

Query, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  240 bits (613), Expect = 9e-68
 Identities = 176/547 (32%), Positives = 270/547 (49%), Gaps = 36/547 (6%)

Query: 13  AYQYPLLIKRLLMSGARYEKTREIVYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTVA 72
           A   PL     L   A+    R+ V     RY+Y  L ER   LA+ L   GV+ G+ VA
Sbjct: 15  ANHVPLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVA 74

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYQAI 132
           ++  +    LE  + +P  GAV+  IN+RL    I + + H   + ++ + EF     A+
Sbjct: 75  ILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREF----GAV 130

Query: 133 AGH-LTTVDKTLLLTDGDSKTAELPNLVGE--YESLLAAASPKYDFQ--DFDENSVATTF 187
           A   L  +D   LL   D   AE  +L  +  YE+ LA   P         +  S+A   
Sbjct: 131 ANQALAMLDAPPLLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAIN- 189

Query: 188 YTTGTTGNPKGVYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVHAWGLP 247
           YT+GTTG+PKGV   HR   L+    A I         LG   VY+   PMFH + W   
Sbjct: 190 YTSGTTGDPKGVVLHHRGAYLNACAGALIFQ-------LGPRSVYLWTLPMFHCNGWSHT 242

Query: 248 YVATMLGLKQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVDFGGWKIV 307
           +  T+ G   V   +  P+ +     +  VT     P ++ M+++A+ A         ++
Sbjct: 243 WAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVPV-SVI 301

Query: 308 IGGSALNRTLYEAAKARGIQLTAAYGMSET-GPLVSCAHLN--EELMAGTEDERITYRIK 364
            GG+A    +  A +ARG  +T AYGM+E+ GP   C      +EL     + R  +  +
Sbjct: 302 TGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPL---EARAQFMSR 358

Query: 365 AGVPGPLVE-AAIMDAE-GNFLPADGESQGELVLRAPWLTEGYYNEPQKGAELWAGGWMH 422
            GV  PL+E A ++D + G  +PADG + GELV+R   + +GY + P+      A GW+H
Sbjct: 359 QGVAHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLH 418

Query: 423 TGDVATLDAFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGIADPQWGE 482
           TGD+A L   G ++I+DR KD+I +GGE ISSL +E+++ +HP V E AVV   D +WGE
Sbjct: 419 TGDLAVLHLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGE 478

Query: 483 RPFALLVVRDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRI 542
            P A + +R   +    +L    +       L+ +  P  +++V ++PKT+ GK+ K  +
Sbjct: 479 TPHAFVTLRADALASGDDLVRWCRE-----RLAHFKAPRHVSLV-DLPKTATGKIQKFVL 532

Query: 543 RIDIIEW 549
           R    EW
Sbjct: 533 R----EW 535