Pairwise Alignments

Query, 448 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

 Score =  275 bits (702), Expect = 3e-78
 Identities = 157/391 (40%), Positives = 229/391 (58%), Gaps = 4/391 (1%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDLRLGEDNGLDV 70
           + +VDD+ +I       L+ EG T  + +SA    + + RQ  D+   D+R+   +GLD+
Sbjct: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66

Query: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           LA++R Q P + V+I+TAHS +D+AV + Q GA +YL KP   D+      +  +  Q  
Sbjct: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQHAQEQ 126

Query: 131 ARLEALEGEVRQPKDGLDSHSPSMMVVLETARQVAGTDANILILGESGTGKGELARAIHG 190
              EA     R P+  +   +P+M  V     +++ ++  +LI GESGTGK  +A A+H 
Sbjct: 127 QNQEAPPALTRTPE--IIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHR 184

Query: 191 WSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGD 250
            S R+    + +N  ++  +LMESELFGH +GAFTGA+    GR  QADGGTLFLDEIGD
Sbjct: 185 HSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGD 244

Query: 251 FPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYRLNV 310
            P   Q +LLR + D E+ RVG     + DVRI+AAT+ NLE +V  G+FREDL +RLNV
Sbjct: 245 MPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNV 304

Query: 311 ITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEAREALLNYRWPGNIRELRNV 370
           I +H+P + +R EDI TLA  FL+R  +E A   +    E  E L N  WPGN+R+L N 
Sbjct: 305 IRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENT 364

Query: 371 VERASIICPQEKVEITHL--GMAEQPGNNAP 399
               +++    +V I+ L   +   P ++AP
Sbjct: 365 CRWITVMASGREVHISDLPPELLSLPQDSAP 395