Pairwise Alignments

Query, 448 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  278 bits (710), Expect = 4e-79
 Identities = 165/397 (41%), Positives = 236/397 (59%), Gaps = 22/397 (5%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDLRLGEDNGLDV 70
           IL+V+DE+ I    R  LE   Y V+ A S  +A        FDL   DLRL    G ++
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIATFDLIVSDLRLPGAPGTEL 63

Query: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           + ++    P   V+I+T+++++ +AVD+++ GA DY+ KP   D++  A A+ L  RQ +
Sbjct: 64  I-KLGQGTP---VLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQNA 119

Query: 131 ------ARLEALEGEVRQPKDG-----------LDSHSPSMMVVLETARQVAGTDANILI 173
                 A   A  G+      G           + S  P M  +    R+VA TD+N+LI
Sbjct: 120 PAAAPPAEPRASNGKATASDKGSAATANGEIGIIGSCQP-MQDMYSKIRKVAPTDSNVLI 178

Query: 174 LGESGTGKGELARAIHGWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLG 233
            GESGTGK  +ARA+H  S+R+K   +++NC ++   L+ESELFGH +GAFTGAS    G
Sbjct: 179 QGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAG 238

Query: 234 RVNQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLED 293
            V  ADGGTLFLDEIG+ PL  Q +LLR +Q+ E  RVG   +++ DVR++AAT+ +L++
Sbjct: 239 LVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKN 298

Query: 294 MVRDGRFREDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEARE 353
           + + G+FREDL YRL+VI L LP LRER  D+  +A+ FLAR      R    FS EA +
Sbjct: 299 LAKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLARQSARIGRDDLHFSAEAEQ 358

Query: 354 ALLNYRWPGNIRELRNVVERASIICPQEKVEITHLGM 390
           A+ +Y WPGN+REL N VERA I+    ++    LG+
Sbjct: 359 AIRHYSWPGNVRELENAVERAVILSESAEISAELLGI 395