Pairwise Alignments

Query, 448 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  271 bits (694), Expect = 2e-77
 Identities = 174/447 (38%), Positives = 239/447 (53%), Gaps = 24/447 (5%)

Query: 10  RILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDLRLGEDNGLD 69
           ++LLV+D+  + +     LE  G+      SA +A   +    F L   D+ +   +G  
Sbjct: 4   KVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDGHQ 63

Query: 70  VLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQL 129
           +L+Q+R Q P + V+++TAH+AV+ AV+A++ GAADYLVKP  P  L       L  R  
Sbjct: 64  LLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALL-----NLVERHA 118

Query: 130 SARLEALEGEVRQPKDGLDSHSPSMMVVLETARQVAGTDANILILGESGTGKGELARAIH 189
           + R+   EG V        +  P+   +LE A +VA +D+ +LI GESGTGK  LAR IH
Sbjct: 119 AGRVTGEEGPV--------ACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIH 170

Query: 190 GWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIG 249
             S R+ +  V INC ++   ++E+ LFGH +GAFTGA  +  G+  QA+GGTL LDEI 
Sbjct: 171 QQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEIS 230

Query: 250 DFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYRLN 309
           + P+ LQ KLLR +Q++E ERVG       D+R+LA TN +L   V  GRFREDL YRL+
Sbjct: 231 EMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLS 290

Query: 310 VITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEAREALLNYRWPGNIRELRN 369
           V  L   PLRER  DIL LA+R LAR V +    +   S  AR  L  Y WPGN+REL N
Sbjct: 291 VFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDN 350

Query: 370 VVERASIICPQEKVEITH--------LGMAEQPGNNAPRIGAALSLDQLEKAH---IGAV 418
            ++RA I+     +E           L    +P          L  D     +   I  +
Sbjct: 351 ALQRALILQQGGVIEAADFCLAGAIPLSAGTEPSLEVVADAGGLGDDMRRHEYQMIIDTL 410

Query: 419 LATSDTLDQAARTLGIDASTLYRKRKQ 445
            A      +AA  LGI   TL  K  Q
Sbjct: 411 RAERGRRKEAAERLGISPRTLRYKLAQ 437