Pairwise Alignments

Query, 448 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

 Score =  281 bits (718), Expect = 4e-80
 Identities = 177/467 (37%), Positives = 255/467 (54%), Gaps = 32/467 (6%)

Query: 7   LQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDLRLGEDN 66
           ++  IL+V+D+  +    R  L  +GY V   +SA  A   ++R   D    D  L   +
Sbjct: 1   MEHSILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMS 60

Query: 67  GLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEV 126
           G D+L  +  QAP ++V+++T +  V+ AV A++ GA  YL KP    +L+L   K L  
Sbjct: 61  GHDLLRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALAT 120

Query: 127 RQLSARLEALEGEVRQPKDGLDS---HSPSMMVVLETARQVAGTDAN--------ILILG 175
            ++   L   +    Q K GL +    SP M+ +  T RQV   +          +LI G
Sbjct: 121 ERMERTLSFYQEREAQ-KSGLQALIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEG 179

Query: 176 ESGTGKGELARAIHGWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRV 235
           E+GTGK  +ARA+H    RSK   +  NC S+ A L+E+ELFGH +GAFT A E  +G V
Sbjct: 180 ETGTGKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLV 239

Query: 236 NQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMV 295
             ADGGTLFLDEIG+  L LQ KLL+ ++D+   R+G    R+ D+R+++ATN NLE MV
Sbjct: 240 EAADGGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMV 299

Query: 296 RDGRFREDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEAREAL 355
           + G+FR DL +RL +I L +P L  R +DIL LA  FLA   + Y +P   FS EA   L
Sbjct: 300 QQGKFRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLL 359

Query: 356 LNYRWPGNIRELRNVVERASIICPQEKVEITHLG---------MAEQP-------GNNAP 399
           L Y WPGN+RELRN++E+  ++ P E V+   L          +A+QP         + P
Sbjct: 360 LGYSWPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAAMFEMPRHEP 419

Query: 400 RIGAALSLDQLEKAHIGAVLATSD-TLDQAARTLGIDASTL-YRKRK 444
             G   SL  +E+  +   L  +D  + ++AR LG+    L YR  K
Sbjct: 420 EPGT--SLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEK 464