Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  472 bits (1215), Expect = e-137
 Identities = 273/710 (38%), Positives = 418/710 (58%), Gaps = 3/710 (0%)

Query: 5   SIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQTQA 64
           SIQ+ +  LAG  +L +V +LV  +L+   ++ + V+  +    ++  + R+ A  + QA
Sbjct: 7   SIQWKITLLAGLCLLGIVTLLVGLSLYRMEQSSQQVKASSMQMLDEAAQARIEAQGEVQA 66

Query: 65  TLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKILGAY 124
             I+R+           +     L  +  K       +RE L   +   +  NP +LG  
Sbjct: 67  LGIRRQFMDAYQYGHGFSRQVLFLREQAEKRFLDAFDTREDLTRQVKAALQANPDLLGLS 126

Query: 125 IGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKL--ADVNDQNILSTG 182
           + +E NA+D  D  +     +G    GRF  +W +   G L    L  +D++D ++  +G
Sbjct: 127 LVFEANALDGKDELFAGQAELGSNDKGRFALYWSQPTPGKLESMALPESDMSDTSVGPSG 186

Query: 183 VRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQ 242
            +A+ ++ C +   K C I+P  Y++    V++ S + P+M +G     +  D+++N +Q
Sbjct: 187 EKANAWFTCPRTLLKPCVIEPYFYRINGQNVLMTSIVFPLMANGKVIASLSVDINLNSLQ 246

Query: 243 DMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEV 302
            +   A QKLY+G  +++++S  G L  Y+ DASKL ++   +  +N    +  L +   
Sbjct: 247 AVSQQASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLDQVDTANGAQLIGALASSTH 306

Query: 303 RYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMT 362
              +  +H  +++  PF        W ++L +P   ++  ++ L++ ++A+         
Sbjct: 307 IRSLRTDH-QLKVLAPFAPIPEGKPWGVLLDVPEKVLVGPAEALKAQMDAENTRGTLLEL 365

Query: 363 IAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANG 422
             GLL A +GL+++WL+   + RP+  +  ML DIA GEGDLTRRL  D+ DELG +A  
Sbjct: 366 GLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGW 425

Query: 423 FNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTAT 482
           FN FL KLQ +I +V  SVQ    +++ +A IA +T+ G+ +Q  ++DQVATA HEM+AT
Sbjct: 426 FNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSAT 485

Query: 483 AQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENI 542
           AQDVAR+A QAAQAA  ADQA   G+ ++  T+ +IGALA ++  A++ V+ LA +SE I
Sbjct: 486 AQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKI 545

Query: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMI 602
            ++L  IRGIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLAQ+TQ++ EE + +I
Sbjct: 546 GSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVI 605

Query: 603 QQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQS 662
           + LQ GT  VV  M +S  +   SV+   +A  AL  I  AV+VI+DMN QIASAAEEQS
Sbjct: 606 EHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQS 665

Query: 663 AVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712
           AVAE+IN NV  I  V   ++  A+ES+  S  L  LA QQ+ L++QF+V
Sbjct: 666 AVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715