Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  467 bits (1201), Expect = e-135
 Identities = 271/711 (38%), Positives = 416/711 (58%), Gaps = 6/711 (0%)

Query: 5   SIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQTQA 64
           SIQ+ +  LAG  + ++V +LV  +L+    + ++V+  +     +  + R+ +  + QA
Sbjct: 7   SIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQGEVQA 66

Query: 65  TLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKILGAY 124
             I+R+           A     L  +  K        RE +   +   +  NP +LG  
Sbjct: 67  LNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDLLGLS 126

Query: 125 IGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLA--DVNDQNILSTG 182
           + +EPNA+D+ D+ +     +G    GRF  +W +   G L    L   D+ +  I  +G
Sbjct: 127 LVFEPNALDNKDSLFAGKAELGSNETGRFALYWSQPRAGQLTSMALPEHDMANTEIGPSG 186

Query: 183 VRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQ 242
             A+ +++C + + K C ++P  Y +    V++ S + P+ ++G     +  D+++N +Q
Sbjct: 187 QPANTWWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSLQ 246

Query: 243 DMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEV 302
            +   A + LY G   + +++  G L  Y+ DASKL ++   +  +     + +L  G++
Sbjct: 247 ALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKLADGKL 306

Query: 303 RYDIDKEHGHI-ELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGM 361
               D++   +   F P    Q    W ++L +P +A+   ++ L+ +L+A   +     
Sbjct: 307 TTLHDRQRLKVLAAFRPIPDAQP---WGVLLDVPENALTGPAETLKQELDALNTSGTLLE 363

Query: 362 TIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIAN 421
              GL  A +GLL++WL+  G+ RP+  + AML DIA GEGDLTRRLT  + DELG +A 
Sbjct: 364 LSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAG 423

Query: 422 GFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTA 481
            FN FL KLQ  I +V  SVQ    +++ ++ IA  T+ G+ +Q  ++DQVATA HEM+A
Sbjct: 424 WFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSA 483

Query: 482 TAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSEN 541
           TAQDVAR+A QAAQAA  ADQA  +G+ ++  T++SIGALA  +   ++ ++ LA++SE 
Sbjct: 484 TAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEK 543

Query: 542 INAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTM 601
           I ++L  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLAQ+TQ++ EE + +
Sbjct: 544 IGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQV 603

Query: 602 IQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQ 661
           I+ LQ GTR+VV  M+ S  +    V+   +A  AL+ I QAV+VI DMN QIASAAEEQ
Sbjct: 604 IEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQ 663

Query: 662 SAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712
           SAVAE+IN NV  I  V   ++G A+ES+  S  L  LA QQ+ L++QF+V
Sbjct: 664 SAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714