Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  281 bits (719), Expect = 7e-80
 Identities = 181/512 (35%), Positives = 290/512 (56%), Gaps = 26/512 (5%)

Query: 204 APYK--VGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQDMLTSADQKLYNGAGEMAL 261
           APY+  VG  MV +A+ ++    +G   G+VG D++++ + +++ S D   + G G   L
Sbjct: 155 APYQGAVGGLMVTIATPVKSKR-NGELIGVVGGDVTLDTLVEIINSVD---FGGIGHAFL 210

Query: 262 ISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEVRYDIDKEHGHIELFLPFTI 321
             +NG+++  + +  ++ +   D+   + L    ++ AG     +D +   I  F P   
Sbjct: 211 ADANGQVIV-SPNKDQVMKNLKDIYPGSNL----RVAAGMQDVTLDGQDRIIS-FAPVA- 263

Query: 322 GQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGI-GLLVIWLVG 380
           G   A+W + L +       D  K  + L   R + I  M IA   IAG+ GLL+  L+ 
Sbjct: 264 GLPSAQWYIGLSI-------DRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMS 316

Query: 381 HGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSS 440
                PL  M   + DIA+GEGDLTRRL     DE G +A  FN F+ ++   I++V S+
Sbjct: 317 -----PLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSSA 371

Query: 441 VQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHA 500
            + V D SE     +  +  G  +Q +  + VA A++E+ A  Q++ARNA  A+Q AS A
Sbjct: 372 TRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGA 431

Query: 501 DQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLA 560
            + A  G  +V +  +++ AL++ I ++ + ++TL   ++ I  IL  I+GI++QTNLLA
Sbjct: 432 SEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLA 491

Query: 561 LNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQ 620
           LNAAIEAARAGE GRGFAVVADEVRNLA +TQ++ EEI  MI  LQ G+R+ V  M  SQ
Sbjct: 492 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQ 551

Query: 621 SRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVAN 680
             ++++VQ A +A E L ++TQ +  I+ MN  +A+A EEQ+AV E +N ++  I  +  
Sbjct: 552 VSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQ 611

Query: 681 EVAGGADESSAASADLTKLAEQQRRLINQFKV 712
           +     +E+      L + A + ++L+  F++
Sbjct: 612 QGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643