Pairwise Alignments

Query, 595 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  124 bits (310), Expect = 2e-32
 Identities = 98/330 (29%), Positives = 168/330 (50%), Gaps = 32/330 (9%)

Query: 279 RLEHLNPVAQRQLGWDEERLGQGLGEALVRPELDEQLQLVLR-GGSLERAPEDLEVEVEG 337
           R++H   V Q + G  EERL       +   ELDE    + R   +L+ A E+L+  ++ 
Sbjct: 201 RIKHA--VNQLKDGHLEERL-----PTMGSHELDELAHGINRMAETLQNAHEELQHSIDQ 253

Query: 338 ELRLLTYSLTPVSHTQGHILGAVMVLHDVTEQRAFE--RVRSEFVLRASHELRTPVTGMH 395
               +  +L  +      +        D+  + A E  R++SEF+   SHE+RTP+ G+ 
Sbjct: 254 ATEDVRQNLETIEIQNIEL--------DMARKEALEASRIKSEFLANMSHEIRTPLNGI- 304

Query: 396 MAFGLFRERAKFPAESREADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLGPCDVT 455
              G      K     R+ D L+T+ +    L+ +IN++L+FS+ + G   L   P ++ 
Sbjct: 305 --LGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLR 362

Query: 456 DLLEHARARFVEPANAQNIELLVEAQSDLPR-LYADQAQLERVLDNLLGNALRHTAAGGQ 514
           DL++         A+A+ +ELL     D P  L  D  +L+++L NL+ NA++ T  G  
Sbjct: 363 DLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREG-T 421

Query: 515 IRLQARRHGE-----RVIVSVEDNGEGIAYGQQGRIFEPFVQ----VGRKKGGAGLGLAL 565
           I ++A    E     ++ +SV+D G G++      +F+ F Q    + R+ GG GLGL +
Sbjct: 422 IVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLVI 481

Query: 566 CKEIVQLHGGRMGVYSRPGQGTQFYMALPL 595
            K +++  GG +GV S PG+G+QF+++L L
Sbjct: 482 SKRLIEQMGGEIGVDSTPGEGSQFWISLNL 511



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 177 LVGLAVLIIGFVTAHGIARRFGGPIEALAKAADKIGQGDFEVTLPISSAAEMNQLTRRFG 236
           L+ LA L +  + A  ++R    PIE +  A +++  G  E  LP   + E+++L     
Sbjct: 175 LLILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGIN 234

Query: 237 IMAEALR 243
            MAE L+
Sbjct: 235 RMAETLQ 241