Pairwise Alignments

Query, 595 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (319), Expect = 3e-33
 Identities = 112/407 (27%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 VTLPISSAAEMN-QLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDR 276
           V L +S   + N ++    G+  +   + +AT    LL  + RL + +  +   + M+D 
Sbjct: 363 VKLTMSPMRDDNGEINGYLGVATDITDEKKATQ--NLLIERARLHSFVKHVPAAVAMLDN 420

Query: 277 QGRLEHLNPVAQRQLGWDEERLGQGLGEALVRPELDEQLQLVLR---GGSLERAPEDL-E 332
           + +    +       G ++E L  G     +   + E+ Q V R   GG + +  ED+  
Sbjct: 421 ELKFIAYSDKWIEMYGLEKEDL-IGKSHYEIFTNISEEWQEVHRRGLGGEVIKCEEDVWR 479

Query: 333 VEVEGELRLLTYSLTPVSHTQGHILGAVMVLHDVTEQ--------------RAFERVRSE 378
            E     + + + + P   ++  I G +M+  D+TE                   R +SE
Sbjct: 480 PEGWSHDQYVRWEIRPWYRSKEKIGGILMLTEDITEAYFQKNDLQQSMRHAEQANRAKSE 539

Query: 379 FVLRASHELRTPVTGMHMAFGLFRERAKFPAESREADLLDTVNEEMQRLMQLINDLLNFS 438
           F+   SHE+RTP+ G+    G      K     R+   L  VN+    L+ +IND+L+FS
Sbjct: 540 FLANMSHEIRTPLNGI---IGFSDLVLKTELNDRQEQYLSIVNQSANSLLNIINDILDFS 596

Query: 439 RYQNGLQKLTLGPCDVTDLLEHARARFVEPANAQNIELLVEAQSDLPRL-YADQAQLERV 497
           + + G   L +   D+ +L+E A        + + +E+L+    ++PR  + D  +L++V
Sbjct: 597 KIEAGKLDLDIERYDLYELVEQASDIITYVIHQKGLEMLLNISPNIPRFAWIDSVRLKQV 656

Query: 498 LDNLLGNALRHTAAGGQIRLQ------ARRHGERVI-VSVEDNGEGIAYGQQGRIFEPF- 549
           L NLLGNA + T   G+I L+      + ++GE  I  SV D G GI   +Q +IFE F 
Sbjct: 657 LVNLLGNASKFTDK-GEIELKLTPLSNSNKNGEMDIRFSVRDTGIGIKSEKQDKIFEAFS 715

Query: 550 ---VQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMAL 593
              V   +K GG GLGL +   ++QL G ++ + S P +G+ FY  L
Sbjct: 716 QEDVSTTKKYGGTGLGLTISNRLLQLMGSKLQLTSTPNRGSTFYFDL 762