Pairwise Alignments

Query, 258 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 232 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

 Score =  143 bits (361), Expect = 3e-39
 Identities = 97/242 (40%), Positives = 134/242 (55%), Gaps = 29/242 (11%)

Query: 20  PRMDTSHPSVNHDNR---VQFVIVHYTST-NLERSLALLTHGQ--VSSHYLIGDDASGTI 73
           P ++T  PS N+D R   +  +++HYT   +   ++  L + +  VS+HY++ +D  G I
Sbjct: 5   PMIET--PSPNYDERSLPITMLVLHYTGMPDAASAINWLANAESKVSAHYVVTED--GQI 60

Query: 74  YKLVDESQRAWHAGESEWMGRTWLNSSSIGIEIVNPGYKDTPTGRVWYPYSEAQVKSLVV 133
            ++V E +RAWHAG S W G   +NS+SIGIEIVNPG++       + P+ EAQ+ SL+ 
Sbjct: 61  IRMVAEDKRAWHAGRSHWRGIDDVNSASIGIEIVNPGHEWG-----YRPFPEAQMGSLIP 115

Query: 134 LLKDISKRNGIDPKNIIGHSDIAPLRKLDPGPLFPWKRLADEGLGVWPNAQAVARFQVQY 193
           L+ DI +R+ I   NI+GHSDIAP RK DPG LFPW +LA   L       A+ R     
Sbjct: 116 LVHDIVQRHRITRGNIVGHSDIAPARKQDPGELFPWGQLARLRL-------ALPRPTKNL 168

Query: 194 AAELPSITWFQEELARLGYQTPQTGELDVATRHVIAAFQMRFRPSLFDGTPDAESAAILR 253
                + + F   L R GY   +           + AFQ RFRP L DG  D E  AIL 
Sbjct: 169 MDPHWTDSGFMLALERFGYDIAE-------PEPAVVAFQRRFRPELIDGVIDGECRAILL 221

Query: 254 AL 255
           AL
Sbjct: 222 AL 223