Pairwise Alignments

Query, 258 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 226 a.a., N-acetylmuramoyl-L-alanine amidase from Magnetospirillum magneticum AMB-1

 Score =  144 bits (364), Expect = 1e-39
 Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 32/242 (13%)

Query: 25  SHPSVNHDNR-----VQFVIVHYTSTNL-ERSLALLTHGQ--VSSHYLIGDDASGTIYKL 76
           S PS N + R     V  +++HYT     E +LA L   Q  VS+HY+I +D  G ++ L
Sbjct: 5   SRPSPNFEPRPAGAIVDTLVLHYTGMESGEAALARLCDAQAKVSAHYVIEED--GRVFAL 62

Query: 77  VDESQRAWHAGESEWMGRTWLNSSSIGIEIVNPGYKDTPTGRVWYPYSEAQVKSLVVLLK 136
           V E  RAWHAG S W G   +NS SIGIE+VNPG++       +  +  AQ++SL+ L +
Sbjct: 63  VPEDMRAWHAGASSWRGEPDVNSRSIGIELVNPGHEFG-----YRAFPGAQIESLIRLCR 117

Query: 137 DISKRNGIDPKNIIGHSDIAPLRKLDPGPLFPWKRLAD-EGLGVWPNAQAVARFQVQYAA 195
            I +R+ I  +N++GHSD+AP RK DPG LFPW  LA+  G+G+WP  +           
Sbjct: 118 GILERHPIPARNVVGHSDVAPTRKEDPGELFPWADLAERHGIGLWPCGE---------PT 168

Query: 196 ELPSITWFQEELARLGYQTPQTGELDVATRHVIAAFQMRFRPSLFDGTPDAESAAILRAL 255
            LP        LA +GY            +  + AFQ  FRP   DG  D ES   LR+L
Sbjct: 169 PLPPEHVLLSGLAHVGYDIHD-------PKATLTAFQRHFRPWKVDGLVDEESVGRLRSL 221

Query: 256 NR 257
            R
Sbjct: 222 LR 223