Pairwise Alignments

Query, 241 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 236 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  130 bits (326), Expect = 3e-35
 Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 9/240 (3%)

Query: 1   MATLKAQHLAKAYKSRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGRV 60
           M  L  + +   Y S QV+ +VS+ +  G+ V +LGPNGAGK+T    I GL+    G +
Sbjct: 1   MTLLSVEGIRSGYGSLQVLSEVSIEVAEGEAVAILGPNGAGKSTLLRTISGLITPTAGAI 60

Query: 61  LIDDLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMA---ILETRKELDRDGRRKE 117
             D  D+   P H    AG+  +P+   IF  LSV +N++     L TR       R   
Sbjct: 61  SFDGHDLLAMPAHRIPHAGLVQVPEARHIFPSLSVRENLLVGGTPLPTR-----GAREAA 115

Query: 118 LESLLQEFHINHI-RDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDI 176
           L+ + + F +    RD    +LSGG+++ V I RAL + P+ ++LDEP  G+ P+ V ++
Sbjct: 116 LDDIWRIFPMLVTKRDAPAGTLSGGQQQMVAIGRALMSRPRLVMLDEPSLGLAPLVVREL 175

Query: 177 KQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDSATILANDLVKEVYLG 236
            +++  L   G+ +L+ + +V   L +   AY+V +G +   G ++ +  +D V++ YLG
Sbjct: 176 YEVLRSLVQSGLTLLLVEQDVPVALSLVSRAYVVENGSIALSGTASELRESDHVRQAYLG 235