Pairwise Alignments

Query, 497 a.a., RNA polymerase factor sigma-54 from Pseudomonas simiae WCS417

Subject, 497 a.a., RNA polymerase factor sigma-54 from Pseudomonas simiae WCS417

 Score =  977 bits (2526), Expect = 0.0
 Identities = 497/497 (100%), Positives = 497/497 (100%)

Query: 1   MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNAD 60
           MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNAD
Sbjct: 1   MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNAD 60

Query: 61  PLADNIEQKPNSDVQEPSYQETAPTVDNLEEGDWNERIPNELPVDTAWEDVYQTSASSLP 120
           PLADNIEQKPNSDVQEPSYQETAPTVDNLEEGDWNERIPNELPVDTAWEDVYQTSASSLP
Sbjct: 61  PLADNIEQKPNSDVQEPSYQETAPTVDNLEEGDWNERIPNELPVDTAWEDVYQTSASSLP 120

Query: 121 SNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI 180
           SNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI
Sbjct: 121 SNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI 180

Query: 181 LEAFDPELDIELDEIEAVLHRIQQFEPAGIGARTLSECLLLQLRQLPAKTAWLTEAQRLV 240
           LEAFDPELDIELDEIEAVLHRIQQFEPAGIGARTLSECLLLQLRQLPAKTAWLTEAQRLV
Sbjct: 181 LEAFDPELDIELDEIEAVLHRIQQFEPAGIGARTLSECLLLQLRQLPAKTAWLTEAQRLV 240

Query: 241 TDYIDLLGSRDYSQLMRRMKLKEDDLRQVIELVQSLNPRPGSQIESSEAEYVVPDVIVRK 300
           TDYIDLLGSRDYSQLMRRMKLKEDDLRQVIELVQSLNPRPGSQIESSEAEYVVPDVIVRK
Sbjct: 241 TDYIDLLGSRDYSQLMRRMKLKEDDLRQVIELVQSLNPRPGSQIESSEAEYVVPDVIVRK 300

Query: 301 DNERWLVELNQESVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL 360
           DNERWLVELNQESVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
Sbjct: 301 DNERWLVELNQESVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL 360

Query: 361 MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK 420
           MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK
Sbjct: 361 MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK 420

Query: 421 YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK 480
           YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
Sbjct: 421 YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK 480

Query: 481 YRESLGIAPSSERKRLM 497
           YRESLGIAPSSERKRLM
Sbjct: 481 YRESLGIAPSSERKRLM 497