Pairwise Alignments

Query, 285 a.a., glmZ(sRNA)-inactivating NTPase from Pseudomonas simiae WCS417

Subject, 292 a.a., RNase adapter protein RapZ from Variovorax sp. SCN45

 Score =  220 bits (561), Expect = 3e-62
 Identities = 133/292 (45%), Positives = 183/292 (62%), Gaps = 17/292 (5%)

Query: 3   LIIVSGRSGSGKSTALNVLEDSGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSIDAR 62
           L++++G SGSGKS AL+ LED+G+YC+DNLP  LL      AL H E   P VA+++D R
Sbjct: 5   LVLITGMSGSGKSVALHALEDAGYYCVDNLPPELLTAFI--ALQH-EQQTPRVAIAMDVR 61

Query: 63  NLPSHLERFPQLLEEVRAK-HIHCDVLYLDADEETLLKRFSETRRRHPLS---------S 112
           +  S L   PQ LE +R    I    L+LDA  + LL+R+SETRRRHPLS          
Sbjct: 62  SGVS-LPIVPQQLEALRRDGEISLRSLFLDATTDALLRRYSETRRRHPLSRQEGRTDVPE 120

Query: 113 PHRSLAEAIEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESF 172
            HR L +AIE E +LL  + D AD+ I+T+ +   QL+  IK  L++ P+     + ESF
Sbjct: 121 QHRVLVQAIELERELLADLRDGADV-IDTSLIRPAQLQSYIK-SLISAPQSVLTLVFESF 178

Query: 173 GFKRGMPVDADLVFDVRCLPNPYWKPELREQSGLDQAVADYLAAQPDVEEMFQDISSYLL 232
            FKRG+P+DAD VFDVR LPNP++ P LR  +G D+ V ++L    +V  M+ DI  +L 
Sbjct: 179 AFKRGVPLDADYVFDVRMLPNPHYVPALRPLTGRDEPVIEWLREHDEVARMYDDIEQFLS 238

Query: 233 KWLPRFAASNRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDL 284
            WL   A  +R+YVT+AIGCTGG HRSV+L E+L ++       ++ RHR+L
Sbjct: 239 HWLDALARDHRSYVTVAIGCTGGQHRSVFLVEQLARLFGARWGALK-RHREL 289