Pairwise Alignments

Query, 285 a.a., glmZ(sRNA)-inactivating NTPase from Pseudomonas simiae WCS417

Subject, 284 a.a., RNase adapter RapZ from Dickeya dianthicola ME23

 Score =  266 bits (680), Expect = 4e-76
 Identities = 143/288 (49%), Positives = 188/288 (65%), Gaps = 13/288 (4%)

Query: 1   MRLIIVSGRSGSGKSTALNVLEDSGFYCIDNLPAGLLPELAERALIHTELAQPL-VAVSI 59
           M L+IVSGRSGSGKS AL  LED GFYC+DNLP  LLPELA     HT   + +  AVSI
Sbjct: 1   MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELA-----HTLAERNISAAVSI 55

Query: 60  DARNLPSHLERFPQLLEEVRAK---HIHCDVLYLDADEETLLKRFSETRRRHPLSSPHRS 116
           D RNLP      P++LE    +        +L+LDAD  TL++R+S+TRR HPLSS + S
Sbjct: 56  DVRNLPET----PEVLEHALTRLPQSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLS 111

Query: 117 LAEAIEDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKR 176
           L  AI++E  LL P+   ADL I+T+ +++++L + ++ RLL + E     + ESFG+K 
Sbjct: 112 LESAIDEENDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGYKH 171

Query: 177 GMPVDADLVFDVRCLPNPYWKPELREQSGLDQAVADYLAAQPDVEEMFQDISSYLLKWLP 236
           G+P+DAD VFDVR LPNP+W P+LR  +GLD+ VA +L    +V        SYL  WLP
Sbjct: 172 GIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLP 231

Query: 237 RFAASNRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDL 284
               +NR+Y+T+AIGCTGG HRSVY+ E+L    +   KNVQ RHR L
Sbjct: 232 MLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTL 279