Pairwise Alignments

Query, 285 a.a., glmZ(sRNA)-inactivating NTPase from Pseudomonas simiae WCS417

Subject, 283 a.a., RNase adapter protein RapZ from Acinetobacter radioresistens SK82

 Score =  239 bits (610), Expect = 5e-68
 Identities = 129/283 (45%), Positives = 189/283 (66%), Gaps = 6/283 (2%)

Query: 2   RLIIVSGRSGSGKSTALNVLEDSGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSIDA 61
           R++IV+G+SGSGKS+AL VLED G+YCIDNLP  LL E+  +      L Q  +A+ +D 
Sbjct: 3   RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLTEIVLKLDRENNLEQ--LALGVDV 60

Query: 62  RNLPSHLERFPQLLEEVRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSPHRSLAEAI 121
           R+  + L+ F Q+ E+++ +H   DV+YL   ++ L+ RFS +RR HPL+S  +SL E I
Sbjct: 61  RSTRADLQEFDQVFEQLQ-QHGSVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECI 119

Query: 122 EDETKLLGPIIDLADLKINTTSLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGMPVD 181
           ++E +LL PI   A + I+TT  +++ L+  + L  L Q       +++SFG+K G+P+D
Sbjct: 120 QEEKQLLMPIQFRATVHIDTTDKSVHDLKHTL-LSKLGQANR-LILILQSFGYKHGIPLD 177

Query: 182 ADLVFDVRCLPNPYWKPELREQSGLDQAVADYLAAQPDVEEMFQDISSYLLKWLPRFAAS 241
           AD VFDVR LPNP+W  ELR+ SGLD+ V  +L +     EMF DI  +L KWLP FA  
Sbjct: 178 ADYVFDVRHLPNPHWDLELRKYSGLDEPVRKFLESSDQPNEMFLDIYHFLNKWLPAFAKG 237

Query: 242 NRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDL 284
           +R Y+T++IGCTGG HRSVY+ +RL + L+    ++QV HR++
Sbjct: 238 HRHYMTVSIGCTGGQHRSVYIVDRLKKSLEAQW-SIQVLHREM 279