Pairwise Alignments

Query, 485 a.a., ribonuclease G from Pseudomonas simiae WCS417

Subject, 908 a.a., Ribonuclease E (EC 3.1.26.12) from Sphingobium sp. HT1-2

 Score =  236 bits (603), Expect = 2e-66
 Identities = 138/401 (34%), Positives = 221/401 (55%), Gaps = 8/401 (1%)

Query: 61  GLDRAAFIHASEISLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY 120
           G D A  +    ++LR    ++ +   +   Q L+VQV K+  G+KGA LTT LS+  RY
Sbjct: 157 GDDAADELRRKRMALRRRYKIQDV---IKRRQVLLVQVVKEERGNKGAALTTYLSLAGRY 213

Query: 121 LVYMPRTAHVG-ISLKIEDEAERERLKKVVSDCVAAEGIKEAGGFILRTAAEGAGADEIL 179
            V MP T+H G IS KI + A+R+RLK ++++      +    G I+RTA       EI 
Sbjct: 214 CVLMPNTSHGGGISRKISNAADRKRLKSIIAEMALPSSM----GCIVRTAGLQRTKPEIK 269

Query: 180 MDIRYLRRLWDQIGAQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRETFQRTT 239
            D  YL RLWD+I  +     AP +I+ D  L  R +RD+ +  IE++ ++    ++   
Sbjct: 270 RDFDYLARLWDEIREKTLRAAAPELIHNDSDLIKRAIRDIYNKDIEEVIVEGEHGYKAAK 329

Query: 240 QFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEAMTTI 299
            F+  LMP  A R++ Y     +F    VED++       V LKSGGYLV++P EA+ +I
Sbjct: 330 DFMKLLMPSHARRVKQYADAVSLFQRASVEDQLAAMYNPVVQLKSGGYLVINPTEALVSI 389

Query: 300 DVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRT 359
           D+N+G       +E+T   TNLEAA  IARQLRLR++ G+++IDFIDME   + R+V + 
Sbjct: 390 DINSGRSTREHGIEQTAVATNLEAAREIARQLRLRDMAGLVVIDFIDMEMNSNIRKVEKA 449

Query: 360 LEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPETVCYE 419
           +++ L+ D A+  +  I+  GL++M+R+R R  + +     C  C+G G ++T  +    
Sbjct: 450 MKEALKDDRARIQVGRISGFGLMEMSRQRLRTGVLEASTRQCPHCEGTGLVRTASSAGLG 509

Query: 420 IFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELE 460
             R +  EA   +     + A+Q+    +L+ +   + E+E
Sbjct: 510 ALRMLEEEAARGRGSVITLRASQEAAFYVLNNKRRELDEIE 550



 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 13 ESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDIGLDRAAFIHASE 72
          E+RVAVV+   ++E   E  + + + GNIY  KV RV P +QAAFVD G +R  F+  SE
Sbjct: 14 ETRVAVVKGNRIEEFDFESAEHKQLKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSE 73

Query: 73 I 73
          I
Sbjct: 74 I 74