Pairwise Alignments

Query, 356 a.a., rod shape-determining protein MreC from Pseudomonas simiae WCS417

Subject, 367 a.a., cell wall structural complex MreBCD transmembrane component MreC (NCBI) from Escherichia coli BW25113

 Score =  235 bits (599), Expect = 2e-66
 Identities = 131/355 (36%), Positives = 203/355 (57%), Gaps = 12/355 (3%)

Query: 3   VRLLVLVVLSVALMVVDARFALLKPVRSQMSLVLMQTYWITDLPQRLYQGVASQFGSRTE 62
           +RL++ V++++ +++ D+R      +R+ M   +   Y++++ P+ L  GV+    SR +
Sbjct: 13  IRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELLDGVSQTLASRDQ 72

Query: 63  LVAENEKLKTENLLLQGRMQKLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFT 122
           L  EN  L+ E LL    +  L    ++N RLRELL S    +E+  V ++I    +P++
Sbjct: 73  LELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMVTQVISTVNDPYS 132

Query: 123 HRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVLLLTDTTHSIPVQVNRNGLRA 182
            +++I+KG  +GV  GQPV+  +G++GQVV +   TSRVLL+ D TH++P+QV RN +R 
Sbjct: 133 DQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHALPIQVLRNDIRV 192

Query: 183 IASGTGNPERLELRHVADTADIKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV 242
           IA+G G  + L+L H+    DI+ GD+LV+SGLG RFP GYPVA V  V  D+ + + ++
Sbjct: 193 IAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVI 252

Query: 243 RAVPTAALNRSRYLLLVFSDNRTPEERANDAAQAQEAEDKQNGTAAIVPATVPKPAFVGP 302
           +A PTA L R RYLLL++  +R     AN     +           ++P  +P P  +GP
Sbjct: 253 QARPTAGLQRLRYLLLLWGADR---NGANPMTPEEVHRVANERLMQMMPQVLPSPDAMGP 309

Query: 303 PAPTAAPAAPVATPVKPAAHSTPPAKPAVTKPAA------ATP---AAKPPATAP 348
             P  A      TP +PA  +   A  A T+PAA      ATP    A+PPA AP
Sbjct: 310 KLPEPATGIAQPTPQQPATGNAATAPAAPTQPAANRSPQRATPPQSGAQPPARAP 364