Pairwise Alignments

Query, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 320 a.a., calcium/sodium antiporter from Dickeya dianthicola ME23

 Score =  193 bits (490), Expect = 6e-54
 Identities = 125/310 (40%), Positives = 189/310 (60%), Gaps = 17/310 (5%)

Query: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60
           ++ GLVLL+ GA+ LV  A  LA +  V P+IIG+TIV  G+S P++ VS+ A L   TD
Sbjct: 8   LIVGLVLLVYGADRLVYGAAVLARTFGVPPMIIGMTIVGMGTSLPELMVSVTAALNHQTD 67

Query: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120
           +AVG+V+GS+I NIL+ LG + LI PL +   L+R ++P M++  LL   L  +  L+ L
Sbjct: 68  MAVGNVLGSNIANILLILGSAVLIRPLTLHSTLLRQELPPMLVVTLLCGILLHDSVLSRL 127

Query: 121 DGLVLLV----ALVAYLGVLHYQTRHSRRPRTLDTVARAP----WLSSVLLMLGGLLILV 172
           DG++LL+     +V  L + H          T + +A  P       ++L +L GL+IL 
Sbjct: 128 DGVILLLTAGGCIVLMLRMAHAAQNRGDDSLTREQMAELPRENNQTVALLWLLLGLIILP 187

Query: 173 LAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGS 232
           ++  +++  A  +A    +SE  IGLT++ VGTSLP LAT+++  L+ E +IA+GN+IGS
Sbjct: 188 MSARIVIDNATVIANYFNISELTIGLTVLAVGTSLPELATAVVGTLKKEDDIALGNLIGS 247

Query: 233 NLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGV----VVLCLPVFYTGYRVTRAEG 288
           N+FN++ VLG+ ALL+P   +V+P A   D  VMLGV     VLCL       R+ +  G
Sbjct: 248 NIFNIVIVLGVPALLSPG--AVNPLAFARDYWVMLGVSALLTVLCL---RQKRRIGQGAG 302

Query: 289 LVLLGLYLAY 298
            +LL  ++AY
Sbjct: 303 ALLLCAFIAY 312



 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 54/134 (40%), Positives = 89/134 (66%), Gaps = 4/134 (2%)

Query: 159 SSVLLMLGGLLILVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAAL 218
           ++VLL++G +L++  A  L+ GAAV +A   G+   +IG+T++G+GTSLP L  S+ AAL
Sbjct: 4   ATVLLIVGLVLLVYGADRLVYGAAV-LARTFGVPPMIIGMTIVGMGTSLPELMVSVTAAL 62

Query: 219 RGEREIAVGNVIGSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVFY 278
             + ++AVGNV+GSN+ N+L +LG   L+   PL++    L  +LP ML V +LC  + +
Sbjct: 63  NHQTDMAVGNVLGSNIANILLILGSAVLI--RPLTLHSTLLRQELPPMLVVTLLCGILLH 120

Query: 279 TGYRVTRAEGLVLL 292
               ++R +G++LL
Sbjct: 121 DSV-LSRLDGVILL 133