Pairwise Alignments

Query, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

Subject, 435 a.a., glucarate transporter from Pseudomonas simiae WCS417

 Score =  400 bits (1029), Expect = e-116
 Identities = 188/432 (43%), Positives = 283/432 (65%), Gaps = 11/432 (2%)

Query: 6   PTHVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQI 65
           PT  R+ I+++LF+   INY DR+ ++IA  +L  +LGID V +G IFSAFGW Y A QI
Sbjct: 15  PTRKRFFIMVLLFITVVINYLDRSNLSIAAPALTSELGIDPVHVGLIFSAFGWTYAAMQI 74

Query: 66  PGGWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFMLRFMVGLAEAPSFP 125
           PGGWL+DR   + +Y  ++  WS+ TV+ G+   F      +ALF+LR  VG  EAP++P
Sbjct: 75  PGGWLVDRVPPRILYTAALLLWSIATVMLGFAASF------IALFVLRMAVGALEAPAYP 128

Query: 126 GNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGIIF 185
            N+R+V  WFP  ER TA  ++ S Q+       P++ W+ ++FGW  VF+  G +GI++
Sbjct: 129 INSRVVTTWFPERERATAIGVYTSGQFVGLAFLTPVLAWLQHAFGWHMVFVATGGVGIVW 188

Query: 186 SLIWLKVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIRQLLTNRM 245
           ++IW  V   P++    N AE + I   G +VDM +   K   +    W  +  +L+ R 
Sbjct: 189 AVIWYAVYREPKEFKGANTAEIDLIREGGGLVDMQEKAAKAPFS----WVDLGIVLSKRK 244

Query: 246 MLGVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGGVISD 305
           + G+YLGQ+C+N   +FFLTWFP YLV+ RGM  +K+G +ASLP +  F+G +  G+ SD
Sbjct: 245 LWGIYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGIFSD 304

Query: 306 YLLRKGHSLTFARKAPIIGGLLISSSIVACNYVDIEWMVVGFMALAFFGKGVGALGWAVV 365
           +L+R+G S+ FARK PIIGGLLIS++I+  NYVD    V+ F+A+AFFG G+ ++ W++V
Sbjct: 305 WLIRRGASVGFARKLPIIGGLLISTAIIGANYVDSTAWVIAFLAVAFFGNGLASITWSLV 364

Query: 366 SDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVAVFSYL 425
           S  +P ++ GL+GG+FN  GNL++I TPIVIG++ S   SF  A+ ++   AL+   SY+
Sbjct: 365 STLAPARLLGLTGGVFNFIGNLSAIATPIVIGFLAS-GDSFAPAITYIAVLALLGALSYV 423

Query: 426 VIVGPIKRVVLK 437
           ++VG ++R+ LK
Sbjct: 424 LLVGKVERIELK 435