Pairwise Alignments

Query, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

Subject, 436 a.a., putative uronate transporter from Pseudomonas putida KT2440

 Score =  194 bits (493), Expect = 5e-54
 Identities = 125/423 (29%), Positives = 207/423 (48%), Gaps = 23/423 (5%)

Query: 12  LILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQIPGGWLL 71
           + ++ L L+  +NY DR+ ++IA +S+QKD+ I    +G + SAF  AY   Q+P G ++
Sbjct: 10  ITVVFLLLIGIVNYLDRSALSIANTSIQKDMMISPSQMGILLSAFSIAYAFAQLPMGMII 69

Query: 72  DRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFM-LRFMVGLAEAPSFPGNARI 130
           DR GSK     S+  WS+     G V  F       A FM LR ++G+ EAP FP  A+ 
Sbjct: 70  DRLGSKIALGASLLGWSVAQAAFGMVNSF-------AGFMGLRVLLGIGEAPMFPSAAKA 122

Query: 131 VAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGIIFSLIWL 190
           ++ WF   ERGT + +  S+      L  PL+   + +FGW+ +FI+ GVIG++ +L WL
Sbjct: 123 LSEWFDANERGTPTGVVWSSTCLGPCLAPPLLTLFMVNFGWRGMFIITGVIGVVLALCWL 182

Query: 191 KVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIR---QLLTNRMML 247
               S  +           +AA G  +  ++   +      PK  Y      L  +R   
Sbjct: 183 TFYKSKARF-------LAELAAEGKPLPSER---QAAAATAPKASYFAGWLDLFKHRSTW 232

Query: 248 GVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGGVISDYL 307
           G  LG   +  + +  LTW P Y  ++ G+ + K  ++ SL    G  G ++ G   D+L
Sbjct: 233 GAVLGFMGVIYMLWLHLTWLPGYFEREHGLDLYKTAWVVSLAYGFGAAGTIVAGRFCDWL 292

Query: 308 LRKGHSLTFARKAPIIGGLLISSSI-VACNYVDIEWMVVGFMALAFFGKGV-GALGWAVV 365
           +R+G S+  +RK  +I GL++++   +  ++V      +  + LA F   +  A  W +V
Sbjct: 293 VRRGMSVLGSRKFSVITGLVLAALFTLPLSFVTGLTGCIMLLCLALFSINMASATAWMIV 352

Query: 366 SDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVAVFSYL 425
           +     Q     G + N  G +A    PIV G+ I  +GSF  A +     AL +  +Y 
Sbjct: 353 NTIVDSQRVASFGSIQNFGGYIAGSVAPIVTGFSIQYSGSFTTAFMISAVVALCSAVAYF 412

Query: 426 VIV 428
           +++
Sbjct: 413 LLL 415