Pairwise Alignments

Query, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

Subject, 436 a.a., D-glucarate permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  442 bits (1137), Expect = e-128
 Identities = 208/432 (48%), Positives = 298/432 (68%), Gaps = 6/432 (1%)

Query: 5   KPTHVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQ 64
           K T VR+ IL+ LFL T  NYADRAT+++    + K+LG D   +G  FS+FG AYV  Q
Sbjct: 6   KRTKVRHTILIFLFLATVFNYADRATLSVVAPIMSKELGFDPEAMGLAFSSFGIAYVIMQ 65

Query: 65  IPGGWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFMLRFMVGLAEAPSF 124
           +PGGWLLDR+GS+ VY  ++  WSL T+ QG +  +G  + ++ L +LR ++G  EAP+F
Sbjct: 66  LPGGWLLDRYGSRLVYGCALIGWSLVTMFQGTIYLYG--SPLIVLVILRLLMGAIEAPAF 123

Query: 125 PGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGII 184
           P N+R+   WFP  ERG  ++++ +AQY +  +  PLM  I+++  W  VF  +G IG++
Sbjct: 124 PANSRLSVQWFPNNERGFVTSVYQAAQYISLGIITPLMTIILHNLSWHFVFYYIGAIGVM 183

Query: 185 FSLIWLKVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIRQLLTNR 244
             + WL  +  P  HP +N+AE ++I + G    +   K   K T    +  I+ +  NR
Sbjct: 184 LGIFWLMKVKDPMHHPKVNQAEIDYIRSGGGEPSLGCKKEPQKIT----FAQIKTVCVNR 239

Query: 245 MMLGVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGGVIS 304
           MM+GVY+GQ+C+  IT+FFLTWFP YL Q +GM+ILK GF+AS+PAI GFIGG+LGGV S
Sbjct: 240 MMIGVYIGQFCVTSITWFFLTWFPTYLYQAKGMSILKVGFVASIPAIAGFIGGLLGGVFS 299

Query: 305 DYLLRKGHSLTFARKAPIIGGLLISSSIVACNYVDIEWMVVGFMALAFFGKGVGALGWAV 364
           D+LL++G+SLT ARK P+I G+L+S  IV  NY   E++V+  M+LAFF KG G LGW V
Sbjct: 300 DWLLKRGYSLTVARKLPVICGMLLSCVIVIANYTSSEFVVIAAMSLAFFAKGFGNLGWCV 359

Query: 365 VSDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVAVFSY 424
           +SDTSPK++ G++GG+FN  GN+ASI TP+VIG I++ T SF +A+++VG+  L+ + SY
Sbjct: 360 LSDTSPKEVLGIAGGVFNMCGNMASIVTPLVIGVILANTQSFDFAILYVGSMGLIGLISY 419

Query: 425 LVIVGPIKRVVL 436
           L IVGP+ R+ L
Sbjct: 420 LFIVGPLDRITL 431