Pairwise Alignments

Query, 331 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

 Score =  106 bits (265), Expect = 7e-28
 Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 6/246 (2%)

Query: 80  ADIIVLPAFWDDFDALCTRYPQVL-PWLRAQHARGAVLCGEATGVFWLAEAGLLDGKEAT 138
           AD+++LP  W + D      P+ L   L+A  ARGA++ G   G F LA+AGLL+G+ AT
Sbjct: 63  ADVVILPG-WRNADE---PVPEALVAELKAADARGALVVGLCLGAFGLAQAGLLNGRRAT 118

Query: 139 TYWRFFNAFTERFPQVQLNQDKHLTDADNLYCAGGTTSACDLYIYLIERFCGANIAQAVA 198
           T+W    AF ER+P+V+++      D   +  + G  +  D  ++L+ R  G   A  VA
Sbjct: 119 THWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEANRVA 178

Query: 199 RDILYEVQRS-YSPGRIGFGGQKLHQDVIILQIQHWLEEHFADKFRFEDVAREHGMSIRN 257
           R ++   QR+   P  I         D  + ++   L    +     +D+A   GMS R+
Sbjct: 179 RHLVVAPQRAGAQPQIIARPTIATPADQRVTELLETLRAAPSATPALDDLAVRMGMSRRS 238

Query: 258 FMRRFQTATGDKPLHYLQRLRIETAKGLLSGSRKSIKTISYEVGYDDASFFARLFRQHTE 317
             R  +  TG     +L+R R+  A+ LL+   + +  I+   G+ DA      FR    
Sbjct: 239 LTRHIRARTGGSLGDWLKRARLAQAQDLLASGARGLDAIAQRCGFADAQALRLAFRSELG 298

Query: 318 LSPNQY 323
            +P Q+
Sbjct: 299 TTPRQW 304