Pairwise Alignments

Query, 331 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 1e-27
 Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 13/281 (4%)

Query: 55  LVSPDGQSV-RSFSDVIMPVDGGLED----ADIIVLPAFWDDFDALCTRYPQVLPWLRAQ 109
           L   +GQ+V R    + +  D  LED     D++++P     +D       + LP    Q
Sbjct: 46  LTLAEGQAVVRGSCGLKVVADRRLEDLPEAVDLLLVPGGPGAYDIALPGIERWLPKAVRQ 105

Query: 110 HARGAVLCGEATGVFWLAEAGLLDGKEATTYWRFFNAFTERFPQVQLNQDKHLTDADNLY 169
             R   +C   TGVF L  AGLL+G   TT+W +     + FP+ ++  ++       L 
Sbjct: 106 AKRFGAIC---TGVFLLGRAGLLNGYRCTTHWNYVERLAQAFPEAKVETEQIYVMDRCLI 162

Query: 170 CAGGTTSACDLYIYLIERFCGANIAQAVARDILYEVQRSYSPGRIGFG---GQKLHQDVI 226
            +GG T+  DL + ++    G  +A  VA+ +L  V R    G+  +G         D  
Sbjct: 163 TSGGITAGIDLALAVVAEDHGKALALEVAKVLL--VARHRQGGQTPYGPLLAAVPRDDSP 220

Query: 227 ILQIQHWLEEHFADKFRFEDVAREHGMSIRNFMRRFQTATGDKPLHYLQRLRIETAKGLL 286
           I ++Q ++ +H    F  + +A    MS RNF R F    G  PL YLQ  RI+  + LL
Sbjct: 221 IARVQAYIVDHIEQAFTVQKMAELVAMSGRNFARTFLREVGITPLQYLQNARIDRTRKLL 280

Query: 287 SGSRKSIKTISYEVGYDDASFFARLFRQHTELSPNQYRQQF 327
                 +K ++ + G+       ++F +   ++P QYR QF
Sbjct: 281 ECGDLPMKVVAAQCGFGSDRHMRKVFFERIGMTPAQYRAQF 321