Pairwise Alignments

Query, 213 a.a., GTP-binding protein from Pseudomonas simiae WCS417

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 13/182 (7%)

Query: 20  AAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQ---LLNFFKLDD 76
           A ++    + +G ++A  GR N GKS+ +N +           PG T+    + F +  +
Sbjct: 181 AVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDGE 240

Query: 77  DRRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKG---LILMMDIRHPMTDFDLLM 133
               +D  G     V    K+H +    + +   +++K    +I +MD R  + D DL +
Sbjct: 241 KYTFIDTAG-----VRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 295

Query: 134 LDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSAPKRMGLEE 193
           L +A+ +G  + I L K D +  G  +   +K + E R  + D   I   SA    G+  
Sbjct: 296 LGFALEAGRAIVIALNKWDGMEPG--ERAYVKTELERRLFFVDFADIHFISALHGTGVGN 353

Query: 194 AY 195
            Y
Sbjct: 354 LY 355



 Score = 26.2 bits (56), Expect = 0.001
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 8/130 (6%)

Query: 34  VAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDDRR---LVDLPGYGYAK 90
           +A  GR N GKS+  N LT    A      G T+   +       R   L+D  G    +
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDE 64

Query: 91  VPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVASGMPMHILLTK 150
           V +  K+      E  L   E    ++ ++D R  MT  D ++ +          ++  K
Sbjct: 65  VGMDEKM-----AEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119

Query: 151 ADKLTYGAAK 160
            D +    A+
Sbjct: 120 IDNIDPDVAR 129