Pairwise Alignments

Query, 574 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 626 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  417 bits (1072), Expect = e-121
 Identities = 221/547 (40%), Positives = 330/547 (60%), Gaps = 7/547 (1%)

Query: 23  WAMITPYWRSEEKGKAWLLLAVVIGLSLFSVAISVWLNHWYKDFYNALENKDTAAFWQQI 82
           W +  PY+      +  L+ A+++ L+LFSV ++V  + WY  FY+AL+  D AAFW  +
Sbjct: 69  WQLAGPYFSFRRSWRPLLVFALLLVLTLFSVRLNVLFSFWYNGFYSALQGLDQAAFWYLL 128

Query: 83  GYFCGIATVAILGAVYRLYLTQMLTIRWRAWLTEKYFARWLGHKNYYQLE-QGGYTDNPD 141
           G F  +AT+ +L +++  Y++Q  +I+WR WLTE+    W+    YY+ +      DNPD
Sbjct: 129 GVFAVLATIHVLRSLFTFYVSQAFSIKWRVWLTERLTHDWMQGDAYYRGQFLAEPVDNPD 188

Query: 142 QRISEDLNSFTSNTLSLGLGLLRNVVSLVSFSIILWGVSGSIDVFGITIPGYMFWCALVY 201
           QRI  D+N+F +N++SL LG +  +VSLV+F+ ILWG+S  + V G+ IP  M +   +Y
Sbjct: 189 QRIELDVNAFVTNSVSLALGAVSALVSLVAFTGILWGLSAPLTVAGVEIPRAMVFAVYLY 248

Query: 202 AAVGSWLTHLIGRRLIGLSNQQQRFEADLRFSMVRVRENAESIALYNGEPNENQRLSARF 261
             + +W+   +GR LI L+   ++  A+ R++++R+RENAE+IA Y G   E   L  RF
Sbjct: 249 VIIATWVAFRLGRPLIRLNFLNEKLTANFRYALMRLRENAENIAFYQGAQVERGTLLGRF 308

Query: 262 GKVWHNYWDIMKVSKRLTFFTAGYEQIATVFAFIVAAPRYFSGKIELGELMQINSAFGNV 321
             +  N W ++  + + + F  G  Q+A VF FI+ APR+FSG I+LG++MQ + AFG V
Sbjct: 309 AALIVNVWALVYRNLKFSGFNLGVSQVAVVFPFILQAPRFFSGAIKLGDVMQTSQAFGQV 368

Query: 322 QGNFSWFISAYSDLAGWRATSDRLLSFQQAMRDNEQRPAAIDVSAEGERLVVQGLGMDLV 381
           Q + S+F  +Y   A +RAT DRL  F  A   N+Q  A   V+ E +   +Q  G+ ++
Sbjct: 369 QDSLSFFRESYDAFAQYRATLDRLTGFLDA---NQQASALPRVTTEDQAHALQITGLQVL 425

Query: 382 --DGRHLLTDAHMIVEPGQRVMLSGRSGSGKSTLLRAMGHLWPAGHGSIRLP-AKRYLFL 438
             DG  L+ D  + +  GQ +++ G SGSGK+TLLRA+  LWP   G +R P   + LFL
Sbjct: 426 RPDGHALIADLDLSLHAGQALLIKGPSGSGKTTLLRALAGLWPYAEGKVRRPTGHQALFL 485

Query: 439 PQKPYLPIGTLKAVLSYPQDDSVYPAERYAQVLETCRLPHLVGRLEEANHWQRMLSPGEQ 498
            Q+PYLP+G L+ V++YP   +        Q L    L HL  RL+ +  W  +LS GEQ
Sbjct: 486 SQRPYLPLGDLRTVIAYPAASNPKDELLMQQALRQVNLAHLAERLDVSCDWSHILSVGEQ 545

Query: 499 QRLAFARALLFAPQWLYMDEATSAMDEEDEATLYQALIDELPGLSIVSVGHRSSLKRFHG 558
           QRLAFAR L   PQ +++DE+TSAMDE  E  LY  L  E+P   +VSVGHRS+L  FH 
Sbjct: 546 QRLAFARVLFNRPQVVFLDESTSAMDEGLEHALYALLRSEMPSALLVSVGHRSTLAAFHT 605

Query: 559 RHVRIEG 565
             + ++G
Sbjct: 606 HRLEVDG 612