Pairwise Alignments

Query, 574 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 688 a.a., Putative type-1 secretion protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 99/424 (23%), Positives = 176/424 (41%), Gaps = 35/424 (8%)

Query: 163 LRNVVSLVSFSIILWGVSGSIDVFGITIPGYMFWCALVYAAVGSWLTH-LIGRRLIGLSN 221
           + ++   + F I+++   G + +  IT    MF  +++ + V    T+ L+ ++  G  N
Sbjct: 271 IADIPIFIIFLIVIYVNLGLVVIVPIT----MFIVSIIISLVNHHYTNELMNKQKEGQKN 326

Query: 222 QQQRF-EADLRFSMVRVRENAESIALYNGEPNENQRLSARFGKVWHNYWDIMKVSKRLTF 280
           +     E  L   M+    N   +  +    NE   L+ +  K+   Y  I+     +T 
Sbjct: 327 RNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQ 386

Query: 281 FTAGYEQIATVFAFIVAAPRYFSGKIELGELMQINSAFGNVQGNFSWFISAYSDLAGWRA 340
            T        V AF +       G +  G ++      G + G  S F S    +     
Sbjct: 387 ITI------MVIAFFMV----IKGDVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEK 436

Query: 341 TSDRLLSFQQAMRDNEQRPAAIDVSAEGERLVVQGLGMDL-VDGRHLLTDAHMIVEPGQR 399
           T   LLSF    +  E+ PA   +S     + ++G+          ++    + +  GQR
Sbjct: 437 TGKDLLSFFDEDQA-EKTPALQSISKCNGDISIRGVSYQYDAQSPMIINRLSIDIPAGQR 495

Query: 400 VMLSGRSGSGKSTLLRAM-GHLWPA-----------GHGSIRLPAKRYLFLPQKPYLPIG 447
           V + G  G+GKS+LL  + G+L P            GH S    ++    +     L  G
Sbjct: 496 VAVVGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTG 555

Query: 448 TLKAVLSY-PQDDSVYPAERYAQVLETCR--LPHLVGRLEEANHWQRMLSPGEQQRLAFA 504
           T+++  +  PQ+D     +  A  L  C   L H +G     N   + LS G+QQ+L  A
Sbjct: 556 TIESNFALKPQNDRGRVLK--ALQLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLA 613

Query: 505 RALLFAPQWLYMDEATSAMDEEDEATLYQALIDELPGLSIVSVGHRSSLKRFHGRHVRIE 564
           R+L         DE TS +DE  E  ++  L + + G +++ V HR  L ++  R + ++
Sbjct: 614 RSLSSDASVFLWDEPTSNLDENTEKQIFDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMK 673

Query: 565 GGRL 568
           GG++
Sbjct: 674 GGKI 677