Pairwise Alignments

Query, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  758 bits (1956), Expect = 0.0
 Identities = 352/539 (65%), Positives = 440/539 (81%), Gaps = 8/539 (1%)

Query: 1   MERIALKPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR 60
           M + A+ PL+++AGL+A  P AQAA+ LV+CSE SPAGFDP QYT+GTDFDASAET+FNR
Sbjct: 1   MLKHAVIPLIVSAGLMAAAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNR 60

Query: 61  LTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFN 120
           LTQF+RGGT V PGLATSWD+S DGLTYTFHLRDGVKFHTT +F PTR FNADDVLFTFN
Sbjct: 61  LTQFERGGTAVIPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFN 120

Query: 121 RLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFA 180
           R+++   PFR+AYP+E PYFTDMG++T IK+++K+D+HTV+F L  VDA+F+QNLAMSFA
Sbjct: 121 RMINKDDPFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFA 180

Query: 181 SVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNL 240
           S+QSAEYAAQLLK+GK  +INQKP+GTGPFVFK YQKDS IRY  NK YWKPEDVK+DNL
Sbjct: 181 SIQSAEYAAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNL 240

Query: 241 VFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHP 300
           +FAIT D + R+QKLK  ECQ++ +PRPAD++ +  D +L +  QAGFNLG++AYNV   
Sbjct: 241 IFAITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDK 300

Query: 301 --------PLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPY 352
                   PL  L+VRQALDM+++K  II +VYQ AGQLA NA+PP QWSYD TIKDA Y
Sbjct: 301 VKGSDQPNPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKY 360

Query: 353 DPTKAKALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEW 412
           DP KAK+LLKEAG+  GT + LWAM VQR  NPNA++ A+M+Q DW+K+G+   I SYEW
Sbjct: 361 DPEKAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYEW 420

Query: 413 GEYIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAK 472
           GEYIKR+K GE+ AMI GW+GDNGDPDNWL VL+ C ++ G+N++KWC+  +D +V++AK
Sbjct: 421 GEYIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSKWCDKKFDGIVKEAK 480

Query: 473 VSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSL 531
            ++D  +R + Y+QAQ ILK+ VP+TPIA+STV+QP+R  V+DFKISPFGL  FYGVS+
Sbjct: 481 ATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSFYGVSV 539