Pairwise Alignments

Query, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  474 bits (1221), Expect = e-138
 Identities = 243/517 (47%), Positives = 330/517 (63%), Gaps = 4/517 (0%)

Query: 7   KPLLLAAGLLACMPLAQ-AASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFK 65
           +PL LA   L      Q AA  LV C+EASP GFD  QYT+    DASAETVFNRL  FK
Sbjct: 17  RPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLVDFK 76

Query: 66  RGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDA 125
            G TE++P LA  WDIS DGLTYTFHLR GVKFHTTD+F PTRD NADDVL++ NR LD 
Sbjct: 77  PGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDP 136

Query: 126 QSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSA 185
             P+        PYF  MG    +KSV K D+HTV   L+  +A F++++AM F S+ SA
Sbjct: 137 NHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSA 196

Query: 186 EYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAIT 245
           EY  QLLK GK  E+N KP+GTGPF+F+RY KD+Q+R+  N  Y++ +    D LVFAI 
Sbjct: 197 EYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKP-PADALVFAIA 255

Query: 246 PDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPLDQL 305
            D+  RLQKL+A ECQV+ YP+P D+  +KQDP L V +      G++A N  H  L+ +
Sbjct: 256 IDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDV 315

Query: 306 KVRQALDMAIDKPAIIKAVYQSAGQL-AQNALPPAQWSYDPTIKDAPYDPTKAKALLKEA 364
           +VR+A++MA D+   +  ++     L   N  PP    Y+   ++ P D  KA+ALL +A
Sbjct: 316 RVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLSQA 375

Query: 365 GVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNGEH 424
           GV  GT + L+       +NPN R+SA+M+Q D +++G+K +I   EW E ++RAKNGE 
Sbjct: 376 GVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEA 435

Query: 425 DAMIYGWTGDNGDPDNWLGVLYSCAAVK-GSNYAKWCNPAYDKLVQQAKVSNDREQRIKW 483
           D +  GW GDNGDPDN+L  L SC AVK G NYA+WCNP + +L+ +A+   D ++R + 
Sbjct: 436 DLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERARL 495

Query: 484 YQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISP 520
           Y +A K+  ++ P   +A+  +F  +R  V+ + I+P
Sbjct: 496 YNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINP 532