Pairwise Alignments

Query, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 526 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  577 bits (1487), Expect = e-169
 Identities = 286/529 (54%), Positives = 376/529 (71%), Gaps = 9/529 (1%)

Query: 10  LLAAGL-LACMPLAQA--ASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKR 66
           +L  GL L  M +A +  A TLVYCSE SP GF+P  +TSGT +DAS+  ++NRL +FK 
Sbjct: 1   MLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPIYNRLVEFKT 60

Query: 67  GGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQ 126
           G TEV PGLA  WDIS+DG TYTFHLR GVK+ ++  F PTR+ NADDV+F+F+R  + Q
Sbjct: 61  GTTEVIPGLAEKWDISEDGKTYTFHLRKGVKWQSSKDFKPTRELNADDVVFSFDRQKNEQ 120

Query: 127 SPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAE 186
           +P+ +       YF  MGL   I  V K+DDHTV+F L   +A F+ +LAM FAS+ S E
Sbjct: 121 NPYHKVSGGSYEYFEGMGLPDLISEVKKVDDHTVQFVLTRPEAPFLADLAMDFASILSKE 180

Query: 187 YAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYW--KPEDVKLDNLVFAI 244
           YA  +LK G  E+++  PVGTGPF   +YQKDS+I Y A   YW  KP+   +D LVF+I
Sbjct: 181 YADNMLKAGTPEKVDLNPVGTGPFQLVQYQKDSRILYKAFDGYWGTKPQ---IDRLVFSI 237

Query: 245 TPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPLDQ 304
           TPDA+ R  KL+  ECQV  YP PADI  MK+D N+++++QAG N+G+L+YNV   PLD 
Sbjct: 238 TPDASVRYAKLQKNECQVMPYPNPADIARMKEDKNINLMEQAGLNVGYLSYNVQKKPLDD 297

Query: 305 LKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLKEA 364
           +KVRQAL  A++K AIIKAVYQ AG  A+N +PP  W Y+  IKD  YDP KAKALLKEA
Sbjct: 298 VKVRQALTYAVNKEAIIKAVYQGAGVAAKNLIPPTMWGYNDDIKDYGYDPEKAKALLKEA 357

Query: 365 GVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNGEH 424
           G+  G T++LWAM VQR  NPNAR  A+MIQ DW K+G++A IV+YEWGEY+KRAK+GEH
Sbjct: 358 GLEKGFTIDLWAMPVQRPYNPNARRMAEMIQADWAKIGVQAKIVTYEWGEYLKRAKDGEH 417

Query: 425 DAMIYGWTGDNGDPDNWLGVLYSC-AAVKGSNYAKWCNPAYDKLVQQAKVSNDREQRIKW 483
             ++ GWTGDNGDPDN+   L+SC AA +GSNY+KWC   ++ L+Q A+ ++D  +RI+ 
Sbjct: 418 QTVMMGWTGDNGDPDNFFATLFSCDAAQQGSNYSKWCYKPFEDLIQPARATDDHNKRIEL 477

Query: 484 YQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSLD 532
           Y+QAQ ++ +Q P   IA+STV++P+RKEVK + + P G   F  VS++
Sbjct: 478 YKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFENVSVE 526